Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48667 |
Symbol | |
ID | 7194905 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 530340 |
End bp | 531750 |
Gene Length | 1411 bp |
Protein Length | 373 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183117 |
Protein GI | 219125710 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.236073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCTGTACCA CATCTGCAGC CTTCTCCCAA CACTCAATTT CACCGAATAT GACGATGGGT GCCCAAATAT TAAACCAAGT CAGCAGCGAC GAAGAAGAAG ACTGTAGTTA CGTCAAGCAG CGACGCTCCA AAGTGGCCAA GTCGCGATCC TCGAAGGGCT TCCCCGTGTC ATACGGCGGC TACAAGGACT ACGCCAAGCT CTCTACCGAC CAGGCGAAGC AGATCATCCA ATCTCCCAAA AGTAAACGCC GTGGACCGCG GGGCGGTGTT GCGTTGCCCT TCCCCGTCAA ACTGTCAGTC ATGCTTGACC ATGTAAAAGC CGCAGGATTG GACGACGTTA TTTCTTGGGC CAGTCATGGC CGCTGTTTTA GCATTCACAA CCCAGACCGA TTCGTTGACG ACGTATTACC AAGGTATGTT TTTCTATGTG GTCGCTTGCG TGAAACCTTC AAGACTAGAA GCCTCACGCA ATGATCGTCC GCTTTACTAA AAACAGATAT GACTTTCGCC AAAGCAAGCT TACTTCGTTT CAACGTCAGT TGAACTTGTA CGGTTTCATG CGTCTATCTG CGGGTCCCGA TCGTGGCGCG TACTACCATG AATTCCTCCT GCGAGGACGA CCTGAAATGA GCAAGTTCAT GCTTCGAGTC CGAGTCAAGA CCAACGGTAT CCGACATTCG ACACCCTCTC CGAATAGTAA CGAGCCGAAT TTTTATCAAA TGCCGCCTTG TGATGAGCCT GAAGTTGGAC CTCGTACACA CGACGAAAAA GATTTTCCCC CAATGGTAGA GACAAAATTT CCTCACACGC ATTGTGGAAG TGACAAAGAA GTGAAGCAAG CCATCGAATT GCTGGAACCT CACCACATTT TTCCACCTTA TCCGGTAAAA AGTACGAATA CAATTCATGC AAGTACGACA CATTCGCCGT CCACAACGCA AGGATGTCCC GTTGAGTCAG TCCGCCATTG TCTTTCCGAT CAGTCTTTGC TGTTATTGGT ATCTCCTTTG GCTTGCCCCC CAGTTCTCGT GAATTCAATG GCTACTACGC AAAATTCTGC TAATTTTTCT CAAAGATACC TCAAACCGAT AAAGGATACC AAAACAACAA GCGAATCGCC CAAGATTTGT TTCTTTGAAG GCCTACAATT CACTCCTGTG GATTTGGAAT CTCCACTATC CAACCAAGAA GCCTACAGCG AATTGTGGGA AATGGATGCT TTTGACGACA CTCCGATTGA AGTTATTTGG TAATCTTTTG ATCGGTTTTC TGTTTTGCAA CGTGCAGAAT AGGGCACCCT CCGCCATTTT GACATTGTCT ACTTTATTTT ACGCCGACTG CACGATCGCT CGCCTGCCCG CCCGCCAGAA ATTTTACTAT ATGCAATTAC ATAAAACGTG TACATTGTTC C
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Protein sequence | MTMGAQILNQ VSSDEEEDCS YVKQRRSKVA KSRSSKGFPV SYGGYKDYAK LSTDQAKQII QSPKSKRRGP RGGVALPFPV KLSVMLDHVK AAGLDDVISW ASHGRCFSIH NPDRFVDDVL PRYDFRQSKL TSFQRQLNLY GFMRLSAGPD RGAYYHEFLL RGRPEMSKFM LRVRVKTNGI RHSTPSPNSN EPNFYQMPPC DEPEVGPRTH DEKDFPPMVE TKFPHTHCGS DKEVKQAIEL LEPHHIFPPY PVKSTNTIHA STTHSPSTTQ GCPVESVRHC LSDQSLLLLV SPLACPPVLV NSMATTQNSA NFSQRYLKPI KDTKTTSESP KICFFEGLQF TPVDLESPLS NQEAYSELWE MDAFDDTPIE VIW
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