Gene PHATRDRAFT_48666 details

Gene Information

• Locus tag: PHATRDRAFT_48666
• ID: 7194903
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: -
• Start bp: 519756
• End bp: 527011
• Gene Length: 7256 bp
• Protein Length: 1643 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002183240
• Protein GI: 219125967

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0961271
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCAAC AACCGTTGTC TCCACGCTCT GACCATTCAA TGGGAACAAG GACTGATGCA 
AGTACTACTC CTTCCATAGG GGATGACAAG GAAACTGGTC CAGTCGCGCC CCTGGTGGCC 
GCGTCTCGGC ACTTGCTTCA ATCCAACGGA AGTATTCTCG GACGGCACGT GGCCCAGGCG 
ATTCTTCCCA AGTTTCCCAC ATTGCTATCT GCCTTACCAA TAGACAGTAT GCACCCCGCT 
CTGTCTTGCA TTGACGGCCG GAAACCTATT ACGTGCGCAC AAATTCGCGA GTTTGTGCTT 
GGGTTGGGGA CGCAGCTTCA CAACCACGGG TGGGGTCGGG GTAATCGGGT GGCGGTGGTC 
CTTCCCAACG GACCAGAACT TGCTTTAGCA CTCTGGGGGA TTGGTGCTTG GTGTTGCTGC 
GTCCCTCTCA ACGCTAACGG AGCTGCCATG GAACTCGAAT CCGATCTGGT GGCATCATCC 
TGTTGCCTTG TCATCGGCGT GCAAGGCAGC ACCACTCGGC AACTAGCCAA CAAGCTCAAC 
ATTTCCTTTG GCGGATTGAC GCCCGATAGA TTTCACGCTG GCTTGTTTTC CCTCAGCTTA 
CCAGATGCAC CACACGGATT GCAAAGCGTT TGTACGAGGG CGGTCGAGCG GGATCGCAGT 
GCCGGAGATC CCATCTCTCC CGTCAGCACC ATCGTCAAAC AGACGACCGT CGCACCGGTA 
CCGAATGCAC ACGACGACAT CGTTCTCGTT TTGTTTACGT CCGGGACGAC CGGAAGTAAA 
AAGCTTGTAC CCCACCGTCT CGGCGATTTA CTTGTCTCGG CAGCTTGCAT TGCCGTATCA 
TGGAACTTGA CTCCGGCGGA CATCAACTGC AATCTTATGC CACTATTTCA CGTTGGTGGT 
ATCGTGCGTC AAGTGTTTTC ACCCATCCTA TCCGGTGGCT GTGTTATTTG CTGTCCGAGC 
TTTGACCCTT TGATATTTTG GAACTTATTG CGCTCACAAT CCTTCACTTG GTACTATGCT 
GCTCCTACCA TGCATCAGTT AATACTACAA ACCGGAAGGG CCGAAGGATT TATTGAGGGA 
AATGGCAGTA ACGAAACGAC AACTATCAAC CCAAAGTTGC GTATGATCGC CAACGCCGCA 
GGTGGACTCT TACCCAGCCT AGCCCGAGAG CTACAACATA TCTTTGGGGC CGCTGTCCTA 
CCGAGTTATG GGATGACCGA GTGCATGCCC ATCAGCTCTC CTCCGGCGAC GTATCAATTG 
GAAAAGCCAG GAACCAGCGG AGTATCCGTG GGGCCAGAAC TTGCAATTCT AAACTTGAAG 
ACGTTAGATT TGCTTGACCA TGGTAAGGAA GGCCCAATTT GTGTTCGGAA CGAACCCTGT 
TTCAGAGGGT ATGAAGACAC TCCCCAAGAA GCTTCGTTTT TGCCCGGCGG TTGGTTCAAC 
ACTGGTGATC TCGGTTACAT AGACGAAGAT GGATTCTTGT ACATCACAGG ACGATCCAAA 
GAAGTTATAA ACCGCGGTGG AGAGATCATT TCGCCACTCG AAGTAGAAGA GGCTCTGAAC 
GGTCACGTAG ATGTAGCTGC ATCAATTGCC TTTTCTACGC AGCATTCCGT CTTGCAAGAA 
GTAGTTGGCA TTGTGATCGT GCCGCAACCT GGTCGGCCAC GAATCGATTT ACCGGCTTTG 
CATGAATTTT TGGGGCAAGG CCGATTGGCC GCACCCAAGT GGCCACAATG TATTGTGTAC 
ATGGACAGTC TGCCGAAGTC GAATACAAAC AAGTTGCTGA GAGTAATGTT GGGTCAGCGA 
CTGGGTTTGC CTGAATTGAA CGACTCTATG TACTCGATTG ATCGCACATT CCAGGCCAAA 
TGCCCCAAAC CAGGCACTTC CGTCTCTGTA GCTATTCCTT GTGAGCGGGT AGCACTGCCT 
TCGGATCAAG TACAGCAAAT CCTCCGGGAA GCACTCGTGA CAAACGTTAA TCAAGAGATT 
GTTGTGGTTC ACCATCCGAC CCGAATGGGT AGTCTTGTGG CTTACGTCTA TCAAGTGGAT 
CGAGTTGCGG TCATAGCAGC TGCCAAAGAG CGGCTGCATG CATATGCTGT GCCCTCTCAT 
GTCGTACAGA TGCCATCTCC GTTTCAGGTG GAATTGGATA TCAGTCCACC GCAGCCGTCA 
GACGCAGTCG GCTCAATTTT GCAGAAGGCC TCGAACTCAG GGCAAGGACC GATGAATCCG 
CTTGTACTGA GCTTGCAGGA GCTATTTCAG GAATTGCTCG ATTTGGACTG CTTACCGGCG 
CCTCGGACTA ACTTTTTTAA TTTGGGCGGT TCATCGATGT TGGCATCCCA GCTGGCCAGC 
AGAGTCCGGA AGCAGCATGA CGTACCATTT GGAGGTGCCG AAGTTTTTCA TCACTCCAGC 
TGCGAGGATA TTGCGACTTT GATTCGCGAA CGACAAGACG GAGAGTGGGA TATCTGCTCT 
TCCGTCGCCA ATGGTGATCT AGCCAGCGTA GCGTCTTCCT TGTTTTCACG AAATCTGGAC 
CTCAAGAGTA CGCCGTTTGA TCCGAATAAG ATGAATCACT CCTCGAGCTG CTGCGCAACA 
TTTCTTCAAT TGATGCCTCT TTTTGTGATT TACCCTGTGT GGCAGCTTTC ACGATTCTAC 
TTGTTTTTTC GTTTGCTGCT GATTCTGCTC AACGCTGTGC CGGGTGGACA CCATTTAGTC 
GCCTTTATTA TCTCAGTCGT GGTCTTTCAC TTTTTGTGGG TCCTTTTGAC GCCACTATTG 
TTTGTTCTGA TCAAATGGAC TATGATTGGG ACCTATAGGA AGGGCAGGTA TCCTCTTTGG 
GGAGAGTACT ATTTGAGATG GTGGTTCGTC GACGTCATGC GCAAATTAAT TGGTCGTGGC 
ATTTGGGGAT CGAATGCCGC AACTCTGAAC CTTTATTACC GTCTTCTTGG TGCTCGGATC 
GGTAGGTACG CCCGGATCAG TCTAGAAGCC GACATTGCCG AATTCGACCT CATCAACATT 
GGAGAAGGCG CATGCATAGA ATACTCAACA CTACGTCCCT TCGGTGTGGA CAATGGAGCC 
ATGATATTGG GTCCGATGGG GGTTGGAAGC TTTTCTAGCG TTGGTGCGCG CTCCGTAGTG 
GCGCCGTACA CGTTTATCCC GGACGATACG CACTTGGGAG CTGCTACGTC AAGCTATGAA 
ATCAGCACTC TACACATAAA CCAGTCCAAG CAATACAATC GTCAAGCCTT TCCGGAACCT 
GGCATCTTGG CCCAACTATT TGTCTGTCGT CCGATTGTTT TCTTGGTAGA AACGATGTCA 
CATATTCCAG CATTACTCAT TCTGTATTGG ATGATCAGCA TGCCATGGCA TGACAATGAA 
GCCTTCGATA CAATGAGCCA CTTGATGGAA TGGTTGTGTA ATGTTCGAAG AATACCTTTC 
TACATTGGGA TTCATGTGGC CCGAGCTCTT CTGGCACCAA TTTTTCAAAT GGGTGCAGCA 
ATCCTGGTGA AAAGGTATAT CATCGGCTCG TTCAAACCTG GCCCTCGCGA CACAGCGTCG 
CAATGGCAAC TATGTCGCCA TCAGCTGGTT TCAACATTAT TTTCCCGGCA AAATATGCAG 
GACTGCACGG AGCTATTGGG TCGACATTAC GAGCTTGTCA GTGTCCTCTA TCGTGTTTTG 
GGAGCCAAGG TGGGAAATCG AGTGTTTTGG CCAGGCCACC AACCTGTGTT TTCGGGAGAG 
TTTGATCTAT TGGAGATTGG CGATGACGTC GTGTTTGGTT CTCGAGCGAC CATGATCTGC 
ACAACGATCG ATTCTTGTGA AAAGATAACT TTAAGTGCCG GATCAAATGT ATCGGACAAT 
GCCGTGGTGC TTCCGGGTAG CATGCTGGGG AAAAACGCGG TTCTCGGATC AAACGCGGTT 
TGTCCTGGAG ACTGGTATCT CCCTGAAGCT AGCGTGTGGT TTGGAGCGAT AGCCGGCGAA 
CCCGTTATGT TGGAAAAGGG AGTGGAAGAC ATCAGTCATC ATATTCTTTC ATCTGAGGTT 
TCGCCGGATA GGATTCAGAT GCAAGGAGAT GAATCGACGC TTCGTCCCTT CGGCAAGGCT 
TTCTACTACA GACAAGCCCC ATATTTCGTA CTACCGATGA GTTTTATGAT TTTATTCACG 
GTGCTCAGTA AGATCATGAT TTCCCTGGTA CATACTGTTC CCCTTCTGGG TGCGCTGCAT 
GCCACGGCAG TTTATTTCTA CGGCCATCAC GACACCCAAG CATATGACTC TGTGTCGGTG 
GCTTCCTCAC AGATGTACAT TGTGCTGCTC TCTTTTTTTC TTCTGACGCA CGCGGGACGC 
GTGGCAGTGT GGATTGGCAT TGAATTGGGG GCCAAGTGGT TGTTTGTGGG TCGGCGCCAG 
CCTGGTCGCT ACAACTGGGA CAAAACACCA TACATTCAAA ACTGGGAGTT GTATCAGATC 
ATCACCAAGG TGCGATCGTC CGGGCGTACG AATTTTATGG ACTTGTTGGC TGGTACTCCT 
TTTCTAGTTG CATTCTTTCG GGGTTTGGGT TGTACTATTG GTCGTGACTG CTGTCTGTAC 
CCGGCTGGGG CAGACCCGTT CATGCCAGAA CCTGACTTGG TGCAGATGGG TGACCGCTGT 
GTCATTGACT GCGCTTCTGT GGCCTGTCAC CTGAATACTC GAGGAAACTT CGAATTGGTC 
AAAATTACGT TGGAGAATGA CGTGACTCTG CGGACGCGGT CTCGCATTCA ACAGGGTGTG 
CACATGGAGA ACAATTCGAT GTTGCTGGAA AAGAGTTTAG CCATGACCGG CGAAGAGATT 
GAGGCCAACA GTGTGTGGCA GGGGGCTCCG GCCGTCCTAC TCTTTTCGTA CGACACCACT 
ACTATGGCGA CGGGGAGATC GACCTGCTCT TCCGATACTT CGGACAGTAT CTTAGACGGT 
GGCTTCGTCT AGACGATGCA AACTCTCCAG GAACACATCT GCCAGTGACA CTAAATCAGT 
ACTTCGTCGT GGCAATATAT TAGGAAATTA AAAATTAAAG TAGAAGAAAC CTTCGATGGA 
AAACCTCGAG ACCCTCGGAC ACTCCAGACC TGGAATAATC GTTGTAGTAG AAATCTTGAC 
AAGTCACGAG ACCTTTGATT GCCTTCTCGA CACTCACGAT AGGCGGGGAT GGGTTGCGGA 
CTGGGAAGAC ATACGGGGGA TGCGACTCCT TTTCAAGCGG GTAAAAGACT ATCGAACACA 
GTCTACACCG GAATACATAG TAGCCATTCG CTTTGGGTCT GAAAGGAACG ACATCCTTAC 
ACCATTCATC CAATCAACCT GATGCGTTTG GCCCGACACA CTCTCCCAAC CTCTCCTTTA 
CCACCAATCA TGCGTCGCCT GCGGTGGTGT CGAGGGGTGC CATGAGGTGC GCTATTTCTT 
GTCCTTCCGG TACGGGCCGG AGTAATTTCC AGACGGTCGC GGCGGCCACG CGGACGACGG 
CCGCCTCACA GTCGTTGATT CCGTAGGCCA CGACGATATC GTGCTCGCCG TCCGGATCCA 
CTTCCAGCCC CGACGCGAAC TGTATAATTT CGGCGTCGTG CGCGTGGGGT GGACTAGCGG 
CGGGGAGGAC CCATTCGGGC GACACGTGGC CGAGACGGTA GGGGGCCGAC GCGGTGAGGG 
TGTAGAAAAC GTGGGTGTAG TGGTGACCAA AGCGTGCGTA CGAGTTGGGT TTGCGATCGT 
GGGGGCGGTG GAAGTGACCC ACACCGAGGT ACACGTCGTG GGCTGGCCAG TAGACCATAA 
AGGCGTTGGT TCCGTGAATG TGCGATTTCG GAGGCGTCTT CGTGTCGGCA ACGGTAGTCC 
GTCGCCGTTG TGCACTCGTG GTATTCGTAT GGAACGGATC CGGCAAAGGT TCCAACAAGC 
GACGATGGGG TTTTCCTTGA CCCTTGTCGT TCTTCTTGCG TTGCACCAGG GGCGTCGTGT 
CCACGTCGAC GACGGTGACG GGATCGATCC AGGTCAAACT TTGCAAAGTG TGCGGCTCGT 
GTCGGGGTTC CATCAAGGCC ATGTTGCGTC CGCAACAAAA GGAAGTGGTT TCCGACGCTC 
GTATTGTGGC TCGCCACGGC GTGGGCGAGG TACCGTCCAG TCCGTCGTTG GTGGCGTCGT 
TGTCGTCGTC GGTGCGCGTC AGGTAGACGC GATTGAGTAC TTGGGTTTCG TACCCAAAGA 
TTTGTCCTTC CCGAAAGGAA ATCCACAACT GTCCTTGGTG GACAAAGAGT CGAGCATCGT 
CCAGTGCAAA AATGTCCCGC CGCGTGTTGG GTTGCGTCCG TGCCGGATAC TTGCGTCCCC 
AGGCCGCGTC CCGTTCCAAT CCAATGGTAA CCTGAGCCTG TACCCGCCAT TGGTCATCGA 
GCAACAAGAG TACGGTCCGG ACCGTATCCG GTTCGGTCTG CGTCGCCCAG AACGGCGGCG 
TGTGGGACGT GTCCCCGTCG GTCCTACTGG TCCTACGGCT GGTGTGTTTT GGGTTCCACA 
CACACTGGGC GTGGGTCATC CCGGTGGTAG CGAGCCAGCG TACGGACGGG GGAAGGAGTG 
TGGCGGCGGC GGGCCAACGC GAGACGTGGA GGAGACTGGG ATTGGTACCA TCGGCAAAGG 
GCCATCGTGG TACGGTGTCG GTATCGTGCG GTTGCCAAGC CGATTGATCC ATGCACAGTT 
TGGTCGGTTC GGCGTCGGAC AAGACGATCG GCCACGATCC CCAGACGTAG GGTGTGGGTG 
CGGCCAAAAA CGGCGGCACG TCACCACGGT CGAGTCCGTA ATAGCGGTGG GACGGGTACG 
GACGAAACGA ACAAGACGTG GACGCTCGTT CGGGTTTGAG TACGACAGAT GGTCGTATCC 
TTTCTGTAGA AGGCGTGAGC ATGTGGTACA GTACAAAGAG ATTGGCACCA ACAAAGAGCA 
AGGCCGAGCC CAAGACGAGA CAAGGGACGT TCGTCCGGGT CCGTCCCCCT GGGGATACTC 
GCGGACGGGA TCGCGGGACG GATCGTTTAG TGCCGGTACG ACTGTGGGTA CGGGCGAACC 
ACCCGTGGCC TGGTCGCACG TGGGGCAACA CGGGGAACAT GGGGACGACT CTCGGTCTGT 
GCAGGATCGC CCAGTGGACA CGGACGCGGT CGAATCGGAC GGCCTCAATT GTTGCGTACA 
CGCACGCTAG AGTCCACACG GTACCGTTTG TCGGTAACAG CACGCGACAC GTTGGTGCAA 
CTGGGACGTT GTGAGATGGC GGACGGTGAC TTTGAGTTGT TCGTTATGTG GTGTAC 

 

Protein sequence

MPQQPLSPRS DHSMGTRTDA STTPSIGDDK ETGPVAPLVA ASRHLLQSNG SILGRHVAQA 
ILPKFPTLLS ALPIDSMHPA LSCIDGRKPI TCAQIREFVL GLGTQLHNHG WGRGNRVAVV 
LPNGPELALA LWGIGAWCCC VPLNANGAAM ELESDLVASS CCLVIGVQGS TTRQLANKLN 
ISFGGLTPDR FHAGLFSLSL PDAPHGLQSV CTRAVERDRS AGDPISPVST IVKQTTVAPV 
PNAHDDIVLV LFTSGTTGSK KLVPHRLGDL LVSAACIAVS WNLTPADINC NLMPLFHVGG 
IVRQVFSPIL SGGCVICCPS FDPLIFWNLL RSQSFTWYYA APTMHQLILQ TGRAEGFIEG 
NGSNETTTIN PKLRMIANAA GGLLPSLARE LQHIFGAAVL PSYGMTECMP ISSPPATYQL 
EKPGTSGVSV GPELAILNLK TLDLLDHGKE GPICVRNEPC FRGYEDTPQE ASFLPGGWFN 
TGDLGYIDED GFLYITGRSK EVINRGGEII SPLEVEEALN GHVDVAASIA FSTQHSVLQE 
VVGIVIVPQP GRPRIDLPAL HEFLGQGRLA APKWPQCIVY MDSLPKSNTN KLLRVMLGQR 
LGLPELNDSM YSIDRTFQAK CPKPGTSVSV AIPCERVALP SDQVQQILRE ALVTNVNQEI 
VVVHHPTRMG SLVAYVYQVD RVAVIAAAKE RLHAYAVPSH VVQMPSPFQV ELDISPPQPS 
DAVGSILQKA SNSGQGPMNP LVLSLQELFQ ELLDLDCLPA PRTNFFNLGG SSMLASQLAS 
RVRKQHDVPF GGAEVFHHSS CEDIATLIRE RQDGEWDICS SVANGDLASV ASSLFSRNLD 
LKSTPFDPNK MNHSSSCCAT FLQLMPLFVI YPVWQLSRFY LFFRLLLILL NAVPGGHHLV 
AFIISVVVFH FLWVLLTPLL FVLIKWTMIG TYRKGRYPLW GEYYLRWWFV DVMRKLIGRG 
IWGSNAATLN LYYRLLGARI GRYARISLEA DIAEFDLINI GEGACIEYST LRPFGVDNGA 
MILGPMGVGS FSSVGARSVV APYTFIPDDT HLGAATSSYE ISTLHINQSK QYNRQAFPEP 
GILAQLFVCR PIVFLVETMS HIPALLILYW MISMPWHDNE AFDTMSHLME WLCNVRRIPF 
YIGIHVARAL LAPIFQMGAA ILVKRYIIGS FKPGPRDTAS QWQLCRHQLV STLFSRQNMQ 
DCTELLGRHY ELVSVLYRVL GAKVGNRVFW PGHQPVFSGE FDLLEIGDDV VFGSRATMIC 
TTIDSCEKIT LSAGSNVSDN AVVLPGSMLG KNAVLGSNAV CPGDWYLPEA SVWFGAIAGE 
PVMLEKGVED ISHHILSSEV SPDRIQMQGD ESTLRPFGKA FYYRQAPYFV LPMSFMILFT 
VLSKIMISLV HTVPLLGALH ATAVYFYGHH DTQAYDSVSV ASSQMYIVLL SFFLLTHAGR 
VAVWIGIELG AKWLFVGRRQ PGRYNWDKTP YIQNWELYQI ITKVRSSGRT NFMDLLAGTP 
FLVAFFRGLG CTIGRDCCLY PAGADPFMPE PDLVQMGDRC VIDCASVACH LNTRGNFELV 
KITLENDVTL RTRSRIQQGV HMENNSMLLE KSLAMTGEEI EANSVWQGAP AVLLFSYDTT 
TMATGRSTCS SDTSDSILDG GFV