Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48655 |
Symbol | |
ID | 7194850 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 495676 |
End bp | 496653 |
Gene Length | 978 bp |
Protein Length | 281 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183111 |
Protein GI | 219125698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.332498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGTTATTC CCGGTTGCAG TGGATCCGAC CACCTTGTTT CGGCCGGTTG TTGAATGGCG GATCGCGATT ACGTCCCACT CGGTATGAAC AGCGCCGGCA GTATGGTGGC GGCGGCCCAG ACCGTCCACC AGCTGTCGTC GGCGCACCAA GCGAGCACCG CCCCGGACTA CTCATTGGAA ACCCCATCCA ATGCCGTCGA ACGTCACAAA TCCCGTCGTC GTCTCAAACG CAATGTGACG CTTGCAGTCG TAGGGGTGGC GTTGGCTTCC GTCGTGACGG CCCTGTTGGC CATGACTTGG CACCTCAGCA CCGTTTGCTA CGTGGCCTTT TGCATCCCCC TGGCGGTTGC ACCCTACACA ATTGTGCAGC GGGTGTGGTT GAACAAGATG CCAACCTTTC GCCAAGTTAT CAATCAGTGT CGGGAGGCGT GCAATCGACT TTATTACCAA AACGGGCGAC TACACGAGGA GATTTCTCGG CTCCAGCTCG AAGTGGCCAA GTTGGAAGGA CTGGAAGAAG AGCTACAGCA AACGGCTCAA CAAAATGGAT TAAACGTCGA AGAGTTCCGT TGTTTAGTAA AGGAAAATGG AGAAGTACAA CGAGAAATGA AGGTAGGTTG GATGGTTGGA GGAAGCTGCT CTGTTCAGGA GTTGGCGTTC GTTCTTTACT CAACACAGTC GTTCTTTTAG AAACTCCAAC AAGCGCGGGA GCTACAAAGC TTTTTGGCAG CAATCCTACA GTCCGATGTG GACGGTAACA GCCAACTTTC CGCAATGGAA ATGAACCAGC TCATGATCCG ACTCCGTGCC TTTTCCACTC GTCCAGTGGA CGAAGAACGT CTCCGTGAGG CCTTTCGCAT GTCATCCGCC TACAGTACCA CAACTCTATT CGCAAAGAAT TCGCAAGTTT ACAAAGAGAG TCAACAAGAT CAAGAGTCGA TATTTGGCGT GGCGTTTGAT TATGACGCAA TGGTCTAA
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Protein sequence | MADRDYVPLG MNSAGSMVAA AQTVHQLSSA HQASTAPDYS LETPSNAVER HKSRRRLKRN VTLAVVGVAL ASVVTALLAM TWHLSTVCYV AFCIPLAVAP YTIVQRVWLN KMPTFRQVIN QCREACNRLY YQNGRLHEEI SRLQLEVAKL EGLEEELQQT AQQNGLNVEE FRCLVKENGE VQREMKKLQQ ARELQSFLAA ILQSDVDGNS QLSAMEMNQL MIRLRAFSTR PVDEERLREA FRMSSAYSTT TLFAKNSQVY KESQQDQESI FGVAFDYDAM V
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