Gene PHATRDRAFT_48655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48655 
Symbol 
ID7194850 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp495676 
End bp496653 
Gene Length978 bp 
Protein Length281 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183111 
Protein GI219125698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.332498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGGTTATTC CCGGTTGCAG TGGATCCGAC CACCTTGTTT CGGCCGGTTG TTGAATGGCG 
GATCGCGATT ACGTCCCACT CGGTATGAAC AGCGCCGGCA GTATGGTGGC GGCGGCCCAG
ACCGTCCACC AGCTGTCGTC GGCGCACCAA GCGAGCACCG CCCCGGACTA CTCATTGGAA
ACCCCATCCA ATGCCGTCGA ACGTCACAAA TCCCGTCGTC GTCTCAAACG CAATGTGACG
CTTGCAGTCG TAGGGGTGGC GTTGGCTTCC GTCGTGACGG CCCTGTTGGC CATGACTTGG
CACCTCAGCA CCGTTTGCTA CGTGGCCTTT TGCATCCCCC TGGCGGTTGC ACCCTACACA
ATTGTGCAGC GGGTGTGGTT GAACAAGATG CCAACCTTTC GCCAAGTTAT CAATCAGTGT
CGGGAGGCGT GCAATCGACT TTATTACCAA AACGGGCGAC TACACGAGGA GATTTCTCGG
CTCCAGCTCG AAGTGGCCAA GTTGGAAGGA CTGGAAGAAG AGCTACAGCA AACGGCTCAA
CAAAATGGAT TAAACGTCGA AGAGTTCCGT TGTTTAGTAA AGGAAAATGG AGAAGTACAA
CGAGAAATGA AGGTAGGTTG GATGGTTGGA GGAAGCTGCT CTGTTCAGGA GTTGGCGTTC
GTTCTTTACT CAACACAGTC GTTCTTTTAG AAACTCCAAC AAGCGCGGGA GCTACAAAGC
TTTTTGGCAG CAATCCTACA GTCCGATGTG GACGGTAACA GCCAACTTTC CGCAATGGAA
ATGAACCAGC TCATGATCCG ACTCCGTGCC TTTTCCACTC GTCCAGTGGA CGAAGAACGT
CTCCGTGAGG CCTTTCGCAT GTCATCCGCC TACAGTACCA CAACTCTATT CGCAAAGAAT
TCGCAAGTTT ACAAAGAGAG TCAACAAGAT CAAGAGTCGA TATTTGGCGT GGCGTTTGAT
TATGACGCAA TGGTCTAA
 
Protein sequence
MADRDYVPLG MNSAGSMVAA AQTVHQLSSA HQASTAPDYS LETPSNAVER HKSRRRLKRN 
VTLAVVGVAL ASVVTALLAM TWHLSTVCYV AFCIPLAVAP YTIVQRVWLN KMPTFRQVIN
QCREACNRLY YQNGRLHEEI SRLQLEVAKL EGLEEELQQT AQQNGLNVEE FRCLVKENGE
VQREMKKLQQ ARELQSFLAA ILQSDVDGNS QLSAMEMNQL MIRLRAFSTR PVDEERLREA
FRMSSAYSTT TLFAKNSQVY KESQQDQESI FGVAFDYDAM V