Gene PHATRDRAFT_48625 details

Gene Information

• Locus tag: PHATRDRAFT_48625
• ID: 7194885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 421182
• End bp: 423293
• Gene Length: 2112 bp
• Protein Length: 666 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002183092
• Protein GI: 219125658

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTACCA TTGCGCCCTT GCGGTCTCCC TTGATTCGCG CCGGTTCCTC CACAACGTCC 
GCCTTTCAGC GGGTACAGAA CGGCATCGGC CATTTAGTCG CCACTGCGGC ACCCGACACC 
AGCAAGAGCA GTACTGGCGG TACGGAATAC AGCACCTACC TGACTCGCGT CAGTCACCAA 
GCACCCGCAC GTTTGATTCC ACTGCAATCC AGTGCCGTCC AAGCGGCCGG CGCCACGATT 
GCCTACCTCG GTAACTACGG TGGCGGCATC CTCCCCGGCG ATACGCTCCA CTACCGAGCG 
GATGTTCTGT CGCACGCTAC TCTCGCCCTG CTGACGCAAG GATCCAATCG TGTCTACCCG 
CAATCCAGTC TCCCACAAAC CGTTGATGGT ATTGCAACAT CACCAGGACC GCAAACGACC 
AAACCCAGTC GCAACGTCCT GGATCTGCGT GTCGACGAAC ACGCGTTGTG CGTCGTGACC 
CCGGATCCAG TGACACCCTT TCGGGGCAGT GTTTTGGAAC AGATACAGAC AGCCGTCATC 
GATCCTAATG CGTCCTTGGC CTTGGTGGAT TGGATCTCCT CCGGTCGTTA CGTCCGCGGA 
GAACGATGGG AACAAACCTC GCTGCTAAAT CAGACGGAAA TTTACTTCAA CGACCACGAC 
TCGTCTCATC CCGTCCTCGT TGATCGTGTC ATCCTGGACG GCAACACCGG TATGGACTTT 
CGGAACGCGT CTTTGCAATT CAACGCCTAC GCCTCCCTGG TCCTGTACGG ATCCCGGGTC 
GAAGCCGTCG TCGAGCGCTG CCACGACATG GCTGCCAGCT TGGCGCGTCC CTACACTCGG 
ATTCGGGAGC GTACCCCCAA CACACGGACA CAAACTCGCA ATAGCGATCA TGACAATCTT 
CCGTTTGATG GGAGCTGTTT GGCGGGACGC GTCCTCTGCA GCGTCACCAC GGTACCTACA 
CGCCACGCTG ATGTGTACGT CGCGCGACTG GCAGCCTGCT CCAACGAAGA CTTGTACCGC 
GTTTTCCACC ATTTATTGCA ACCCACCGCG GAGGACTTGG GCTACCCCAT TTACCGTGAT 
CGCATTCGGG CCGTCACGTC ATCGCCCGTG CGGAACATTT CCGCAGTTCC GGAATCGACG 
TCACGATTGG AGGAGAATGC CGCGTCTGTG GCGATCGTTC CCACCGCTGA CGATCACCTT 
GTACCGCCTC CATCGAGTGA CGCCACTTAT TGGAATGCCT TTGTATTGGC TGACTCGGCC 
TTGCCGACGG GAAGCTTTGC CCACTCGGCC GGCTTGGAAG CCGCTGCGCA ACTGGGTCTC 
GTAGCGGCGG GCAACAACGA CAATTCAATG GTTTCCGATC TCGTCCGCGC CACGGCCACA 
TCCACTATGC AAACCGTCAC GCCCGCACTT CTCGCTAGCC ACAAGGAAGC TTCTTCTAGC 
GCGTTCGGTG CCGACGGAGA GTTGGATGCA GAATTTATCA CACGTTGGAA CCACTTAGAT 
CGAAATCTCC ATTCCTTGCT GGTCGGCAAC GGACCGGCTT GTCGAGCCTC CCTAGACCAA 
GGTCGCAACT TGTTGCGCGT GGTGCAGGTT TGGTTCCAGC AAGGTACCAA AACACACACA 
AAAGTGACTA CCAATCAAGT ACTGTCGATC TTGCAAGCTC GCGTTCGAGA CGACCCCAGC 
GCCGGTCATT TACCCACTAT TTTTGGTGCC GTTGCGGCCT TGTTGGACTT GACCGCCCCG 
CAGGCGTGTC AGCTTCTAGC GTACTGTGTC GCTCGGGATG TGGTGTCGGC CGCCGTGCGC 
CTCAATCTGG TGGGTCCCAT GGCTAGTGTT GGGATTTTGT CCGATGCGCA GCAGGCCGGT 
CAGCGAGGAA TTGCACTGGG ACGCACTTCA TACGAAAACG GACTCTCTGG AGGAAAAGGC 
TCCGGCGCCT CCTGTGCCCC CGTATTGGAC GTCCTGCAAC CGTGCCACGA TTTGCTGTCA 
ACTCGCCTGT TTCGGACGTG ACGATTGAGA AGAGAAAACA TGCCGAATGT GAATTCTAGA 
AATTATGCAA TGTCTGATAA GAGGCCGTAC TTTAAAACAA ACTTCCTTAT GACTAAAAAA 
ACTCGACGAA CG 

 

Protein sequence

MGTIAPLRSP LIRAGSSTTS AFQRVQNGIG HLVATAAPDT SKSSTGGTEY STYLTRVSHQ 
APARLIPLQS SAVQAAGATI AYLGNYGGGI LPGDTLHYRA DVLSHATLAL LTQGSNRVYP 
QSSLPQTVDG IATSPGPQTT KPSRNVLDLR VDEHALCVVT PDPVTPFRGS VLEQIQTAVI 
DPNASLALVD WISSGRYVRG ERWEQTSLLN QTEIYFNDHD SSHPVLVDRV ILDGNTGMDF 
RNASLQFNAY ASLVLYGSRV EAVVERCHDM AASLARPYTR IRERTPNTRT QTRNSDHDNL 
PFDGSCLAGR VLCSVTTVPT RHADVYVARL AACSNEDLYR VFHHLLQPTA EDLGYPIYRD 
RIRAVTSSPV RNISAVPEST SRLEENAASV AIVPTADDHL VPPPSSDATY WNAFVLADSA 
LPTGSFAHSA GLEAAAQLGL VAAGNNDNSM VSDLVRATAT STMQTVTPAL LASHKEASSS 
AFGADGELDA EFITRWNHLD RNLHSLLVGN GPACRASLDQ GRNLLRVVQV WFQQGTKTHT 
KVTTNQVLSI LQARVRDDPS AGHLPTIFGA VAALLDLTAP QACQLLAYCV ARDVVSAAVR 
LNLVGPMASV GILSDAQQAG QRGIALGRTS YENGLSGGKG SGASCAPVLD VLQPCHDLLS 
TRLFRT