Gene PHATRDRAFT_48623 details

Gene Information

• Locus tag: PHATRDRAFT_48623
• ID: 7194831
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: -
• Start bp: 411541
• End bp: 413729
• Gene Length: 2189 bp
• Protein Length: 645 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183220
• Protein GI: 219125925

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAACAGTAGT CGATAAAAAA GAAACAGGGA TATGGCGAGC ATGAAGACTT CATCCCAGCG 
GAAAAATGCC TTCGAAAGAG GTCCTATCAG TCCTTCCAAA TCAGTGCTAC GGTCTCCGCC 
ATCGCAGATT TACACCAGGG GAACAGTTGG GTCGGTCATG ACGGGTTCTC CCCGAAGGCG 
GCCTTCCCCT CGATACTCTC ACTCCAACTC CCTGGCTCTC CCGCGGCGCC CCCGATCAAA 
ATCACCGTCT CGAGAGAGCC GTTCTCGAGT CCATCTTCCT CAATCTCACC GCCGATCACG 
TAGCGCCAGT TCCCAGCCCA TCGTTTCCAG CAGCGATAGT CTACAACGTA CTCCTGTTTC 
TACCCGTTCC ATTATATCCC ATCCGCAGCC TCAAGATGAA ACGCGTTCAG CCCATTCGTC 
CAGATCCTAC CCCCCGAAGA AGCACGTCGA TTTTAGAGAT GATCCCAATG CGTCGTCGAG 
TTCAAAACGA GACCCGTCGC CGGCGCCTTC TTCCGGTTCG GCAAAGGTTC ACATCAAAGC 
CACAAAAAGC GTCATGGAAG GTATGTCGGT TTTGGATCCC CACCTGAAAG TCAGATGTTA 
TGCTCACCTC TTCTTTCTCT TTCGATACGT TCGCTTTTTC CGCAGAATTG TCTAAAGCCC 
CGAATACTGA ACAGCGGATC GTTGCGATAA CCAACGCGTG CGAACTTTTA GACCACTACG 
ACGAGACGTA TCACAATGCG GAACTAGCGC TAGGTGTCGC CTCGGCACTC ATAAAAAGAC 
TGCAGTACTC CTATGGTGAC GCTGAGACTC GTATGTTATG TACAGCATTG GAAATGACCT 
TGCGTGCATC ACCCAGATCA ATTAAACAAA CGTTCGAAAG GTGGCCCTCC ACGTATATGG 
TGCGATTGCT TAAACTGATG GAGTATTCTG AAACGGGAAA CAAAGCGCAC AAGGATATTA 
CCATTGTCAA CATTTTCAAG GTGCTGCTTT CCTTGTCCAG GCCATATGAG CTACGGGCGA 
GTCTACTGCG GCAATCGAGC ATGATGGATC TACTGAAAAG GACCGCCACC AATCAAACGC 
TACCTGCGGA TGCCAAACTT GTACGGTTGA ATTTTATCGC ATTTCTGGCC AAATGCGATG 
CGAATAAATC AATTCTTTAT GAAAGCGAGG AAGTGCTAGA TGGCATTTTA CGAATAGCAA 
ATGGAGAAGT TTTGGATCTA GGAAAGCTAC ATGCTGTGAC AATCCTCATG GAGTTGGCAT 
CGGATCCAAC CATTCAGGTG AGAATGGCTT TCAGTGATCG GATTTTAGGT ACGCTTGTAA 
AACTGCTATT GGTGGAAAAC ACAAAAGCTG CTCGTGAAGC AGCCATCACC GCACTGCAAA 
ACTTGGCCTT TCGTAAAGAA AATCGATTAC GGCTCGTCAC TTTCAAATCG GGAATTGTGC 
TGGAAGCACT CAAAAACGCC CTCACCAAAG ACACCGACTC CAAATCTCGC CGGCGCGCTG 
CAGGAGCACT CACTAATCTC GCGTGTGAAG AAACAGTGGC CATCATGGGG AAGTATAGTG 
GATTACTGGA AGCCTTAGCT ATTGTGACGA CAACCGACGA AGTGGTGGAA GTCCAGACAA 
GGGCGTGTCT TGCATTGACA AAAATCGCAG GCAACACTAC TATCAAAATG GAATCTTTCA 
AACCAATGTT GGATGCTTTG ATAGTGGCAT CGCTAAGCAA AAAAGCTAAT TCAATATCAG 
CAGTTTTTCG CGTCAAAGCG AGAGACGCCG AGAACCGTAA CGTCATGGCT CTTTACCCTG 
GTTTGTTGGA TACTTTGTCC GATGTGTGCC TTTCCGAGAG AGCCAACATC CGGGACAAAG 
ACAATTCCGT CCACGCACTA ATGCATCTTG TGAATGAAGA ACAAAATCGC CTCACGATGG 
GTCAGAACGC TGTTGTATTG GAGGCGCTGG TTGCAGCGGC GTCATACACA GATGCCTCTC 
TCGTAGAAGC TCGGGATAGT GCCATAATCG CTTTGGAACG GCTCGCCACC GAGCATTCGG 
TTCGTCCTGG AATGGCCCGA CACCCGTCTC TTCTCACAGT TGTGGCTGCA GCCGTCGAAC 
GGGAGACCGC CTGGCATGAT CAAGGCCGTG ACTGCGAGCA CGATTATCTG GCCAAACCAC 
TTTTGATGAG CCTGCTCATA GCGATATGA 

 

Protein sequence

MASMKTSSQR KNAFERGPIS PSKSVLRSPP SQIYTRGTVG SVMTGSPRRR PSPRYSHSNS 
LALPRRPRSK SPSRESRSRV HLPQSHRRSR SASSQPIVSS SDSLQRTPVS TRSIISHPQP 
QDETRSAHSS RSYPPKKHVD FRDDPNASSS SKRDPSPAPS SGSAKVHIKA TKSVMEELSK 
APNTEQRIVA ITNACELLDH YDETYHNAEL ALGVASALIK RLQYSYGDAE TPHKDITIVN 
IFKVLLSLSR PYELRASLLR QSSMMDLLKR TATNQTLPAD AKLVRLNFIA FLAKCDANKS 
ILYESEEVLD GILRIANGEV LDLGKLHAVT ILMELASDPT IQVRMAFSDR ILGTLVKLLL 
VENTKAAREA AITALQNLAF RKENRLRLVT FKSGIVLEAL KNALTKDTDS KSRRRAAGAL 
TNLACEETVA IMGKYSGLLE ALAIVTTTDE VVEVQTRACL ALTKIAGNTT IKMESFKPML 
DALIVASLSK KANSISAVFR VKARDAENRN VMALYPGLLD TLSDVCLSER ANIRDKDNSV 
HALMHLVNEE QNRLTMGQNA VVLEALVAAA SYTDASLVEA RDSAIIALER LATEHSVRPG 
MARHPSLLTV VAAAVERETA WHDQGRDCEH DYLAKPLLMS LLIAI