Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48601 |
Symbol | |
ID | 7194870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | - |
Start bp | 333922 |
End bp | 335063 |
Gene Length | 1142 bp |
Protein Length | 360 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183207 |
Protein GI | 219125898 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACGAGTCGC CATGGCGGGC GTGTCGGTCT CTTCATATGT GCTACATTTT GTGGGCTATG TTTTCGTTTG CATCGCTCTG ATACTGGTCA CGTTGTTGGC GTTACCGTTG ATTCTGGCAC AAATTGCCAG ACTTCGCCAA CCAGCGTGTG TATGGAAGTC TCGACGGTCT TCGCTCTTCG TTGGTCGTGT GTGGCATACC CGACACCGAC CCACCAAGCA CGCATTCACG TATCCCCTGT TTATATTTGC ACTAGATTTG CAAGAAGTCG AGGATGAGGA CAATGGCTTG TTTGAAAAAC AACTGTGGCC GCTGTCGTGG ATCATATCGT ATCGACCTAC AGATCATTTA AAAGGCCACA CTGCACAAGT ACAAAGGAGT AGTGGACAGA GACGCCTCCG CAATTCATCG CTCTTGAGCC AAAAAATCTA TGAATTTGTT GCTCTGAAGA CCAACGGGAA ATTCCAACCT TCTGACAAGA CGCATCGAAT TGTGTTGGTA ACTCATCTAT CCTACTACGG CTACTGCTTC AATCCAGTCA GCTTCTACTA TCTGCTCGAT AATTCTTCAA ACAGTACAAC GGCTGCGATC GTTGCGGAAG TTTCCAACAC GCCTTGGAAC GAAATGTATT GCTACGTCTT GCATCCAGAC AGTGAGGACA TTAAGACCGT ATCGCGAAGG GAAGATTCCA CGAACTATGT CTTTCAAAAG AATTTTCACG TTTCACCCTT TATGGAAATG GATTATGTCT ATGATTGGGT CTTTCGGGAT TTTGATGGCG GTGGCATACC GTCAAATATT CACGTTGCCA CTGGAATGAA ACGAGTGGAC GGCTCTTTGC AGTTTTTGGC CACTATGAAC GTCCACCGCA AAGGAATGGA TCCGCTCACT CTGGCTTGGC AAATCGTCTC GTATCCATTC TACTGCGTCA TAATTCAAAT ATGGATTCAT TACGAGGCCT TTTGGCTATT TGCGAAAGGG ATTACCTTCC AGCCGCACCC TACCGGCGCA GAAAGCATGG CAAGCAGGGC GATTGGCTCG ATCATGACGC CTTTCTTTCT TGTTCATACT TGGTTGACAA AAAAGACGCA ATGAGCAGTA TTTTGTAAAA GTGAAGTACA AATAATTGCA GGTTTAAGAA TG
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Protein sequence | MAGVSVSSYV LHFVGYVFVC IALILVTLLA LPLILAQIAR LRQPACVWKS RRSSLFVGRV WHTRHRPTKH AFTYPLFIFA LDLQEVEDED NGLFEKQLWP LSWIISYRPT DHLKGHTAQV QRSSGQRRLR NSSLLSQKIY EFVALKTNGK FQPSDKTHRI VLVTHLSYYG YCFNPVSFYY LLDNSSNSTT AAIVAEVSNT PWNEMYCYVL HPDSEDIKTV SRREDSTNYV FQKNFHVSPF MEMDYVYDWV FRDFDGGGIP SNIHVATGMK RVDGSLQFLA TMNVHRKGMD PLTLAWQIVS YPFYCVIIQI WIHYEAFWLF AKGITFQPHP TGAESMASRA IGSIMTPFFL VHTWLTKKTQ
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