Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48581 |
Symbol | |
ID | 7194741 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 265655 |
End bp | 267141 |
Gene Length | 1487 bp |
Protein Length | 328 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183061 |
Protein GI | 219125594 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.047203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTTCATCATT AAGTTGTTCT ATTTTATAAG TAAAATTCAA TGTAAAGCAT GTAAACAAAG GCATCTACCG TAGAGGACCT CCTTCTGGTT TTCTATTTTA CTCTGGTTTT CCATGCAAGC ATGAGGAGTG TTGCGATTGC GGGGACGCCA AAGCCTGGAA CACTGCTGGT TGCAAACAAC ACCGTCCTCC ACCAGCGCTA CTTTCCGAAA ACGCCACGCA TTACCCAGGC AATCCTTTTG AAGCCATCCA CGCCAGCCGC CGCAGATGCA CACTGCCACC TTGGCCGTTG TGGTCGGAGC CGCCGTACAC AGCCTTTTCA ATACCGTCAA GTGCGCCGGG ATTGGCACCA ATCCTGTACA GTGGAGACAA CAATGGGCCG TTGAGGTGGT CAAAATTGCC AATGGCATCG TGCATCCCAA AGATTACGCC CGCATCCAAC CCAAGGAGCG TCGCGGCAAT GACGACAACA GCAACCCCAC AATATTGACC CGCCCGTTTC TCTGTCCACC TTCTGGGTGG AGGTCACCAC CACCCCTGCC TTCCCAACCG GATTTCATTT GCAACTACAA CTCCACAATG ATAACGTATC CTCAAGAAGC ACAGGCGTCG ACCCAACACC GCCACATGCC AAACAACCCC TCCTGCAGCG GTTGGGTGCC ATGGCAAGCA TGACTACAGA TGGTGCGGAC AACACAATGA ATTGTGCGGA CTGGTGGAAA AAGCGTGCAG AACACGTTGA CGGCATTGGT GTACGCGTTT GATACCGCTT CGCAGAAACA GCAAGAGGCG GACCGGATCA CGTCAAGTCT CTTTCTGCTT TGCTTGCCTG GCTTGCAACT GGTCAGCGGC GTCGGCACGA TTTGTCTGGA TCAACTCGAG GCACGTCAGT ATGATTTTGA ACATACGGCT TCCGGGATGG ATGATGCGGA AGAAGATTTC GTCCATCAGC CGTCGAACGA TAGCTTGTTG CCGGCCTTGA CGTACGTGGC GGGAGACCAT CCTCTCATGA CATCCTTACT AGCGGCTCCG GACGACTGCT TTTGGATTCC CGGTCGACCC GTCACAAGCG GCTGCCGCAT ATGCTGTGCA ATTTAGATTA CGTTATTGAG ACACTCGGTA CTGCGATTCG ACTTCTCTTA CCACGACGCT TTCTGGTATA TCACGGGCCA TGTCAACTGG AATGACAGTT TTGAATACCG GTTCGCGCGA TGGCGCGCAC TACTTGGGTC GTGGCACCCA AGGCGAGCCT GTCGAAACTA ATCTTGTGTG TTTGGCCACA AATCCCGACA CGGATGGTTT TGGACAGGCG CAATCTCAGT TGAGTATTCA GAAACATGAT GTGACTGTTT CGGGACTCGA TCGTTACCAT GCTAAGAAGC ATGGTAACTA TGATGAATGT GCCCACGGTG CCGTGTATAA CACCGTGGAG AATAGTGAAA CGGACCACGA TGGCGCTTGG CAGATCGTGG GGCCGAATGG AAAGTGA
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Protein sequence | MHTATLAVVV GAAVHSLFNT VKCAGIGTNP VQWRQQWAVE VVKIANGIVH PKDYARIQPK ERRGNDDNSN PTILTRPFLC PPSGWRSTGV DPTPPHAKQP LLQRLGAMAS MTTDGADNTM NCADWWKKRA EHVDGIGKQQ EADRITSSLF LLCLPGLQLV SGVGTICLDQ LEARQYDFEH TASGMDDAEE DFVHQPSNDS LLPALTYVAG DHPLMTSLLA APDDCFWIPV LNTGSRDGAH YLGRGTQGEP VETNLVCLAT NPDTDGFGQA QSQLSIQKHD VTVSGLDRYH AKKHGNYDEC AHGAVYNTVE NSETDHDGAW QIVGPNGK
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