Gene PHATRDRAFT_48579 details

Gene Information

• Locus tag: PHATRDRAFT_48579
• ID: 7194739
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: -
• Start bp: 254779
• End bp: 259022
• Gene Length: 4244 bp
• Protein Length: 276 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002183191
• Protein GI: 219125864

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000247197
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTTA CGTTCCTCTC TCTCCACCTT GGGGTGACTC TCATTTCCTT GGAAATCAGA 
GGATTTGATG CTGCAAGAAG TGAATTGATC TCGTTTTCCG CGCAACTTCG TGGTCGGGTT 
TTGCAGCAAA GCGTCCAAAT CGTCGGTAAC AACGGCAACC CAGGTTCTGC GTTTCCGTTG 
ATGGCTTGCC AAGGAGATTG CGATGTTGAC GATGACTGTG CGGGAACGCT TGAGTGCTTC 
CAGCGAGATG GGGGAGAGGC TGTGCCGGGA TGTGGTGGTG GCGAGCTTGA TTCGAGCCGC 
ACCGACTATT GCTACGATCC TGCTGGCGGA CCTACGCCGG CCACGCCAAC CGTTTCCCCT 
GCTACCCAAC CAACTGATAC CCCCGTTACT CAACCGACCG ACGGCCCTCC AGTGGCTATC 
GTCGGTAACA ACGGCAACCC AGGTTCTGCG TTTCCGTTGA TGGCTTGCCA AGGTGACTGC 
GATGTAGACG GTGACTGTGC GGGAACGCTT GAGTGCTTCC AGCGAGATGG GGGAGAGGCT 
GTGCCGGGAT GTGGTGGTGG CGAGCTTGAT TCGAGCCGCA CCGACTATTG CTATGATCCC 
ACTGGCGGAC CCACGCCGGC CACGCCAACC GTTTCCCCTG CTGCCCAACC GACGGATACC 
CCTGCTGCCC AACCAACTGA TACCCCCGTT ACTCAACCGA CCGACGGCCC TCCAGTGGCT 
ATCGTCGGCA ACAACGGCAG CCCGAGTTCC GTATTCCCCT TGTTGGCGTG CCAAGGTGAC 
TGCGATGTAG ACAGTGACTG TGCGGGAACG CTTGAGTGCT TCCAGCGAGA TGGGGGAGAG 
GCTGTGCCGG GATGTGGTGG TGGCGAGCTT GATTCGAGCC GCACCGACTA TTGCTATGAT 
CCCACTGGCG GACCTACGCC GGCCACGCCA ACCGTTTCCC CTGCTGCCCA ACCGACTGAT 
ACCCCTGTTG CCGATCCGTC GCCTACCCCT GCTGCCCAAC CGACTGATAC CCCCGTTGCC 
GATCCGTCGC CTACCCCTGT TGCTGATCCG TCGCCTACCC CTGTTGCCGA TCCCTCACCT 
ACCCCTGTTT CCGATCCGTC GCCTTCCCCT GTTGCCGATG CCTCTCCTTC CCCTGTTGCC 
GATGCCTCGC CTTCCCCTGT TGGAACGGCT GTCTCAGGGA GAGAAACAAT CAACATTGGC 
CCTTAAACTG AAACAGCGAC AATTGTGCAG TCCACAATGA AAACACTTCC GCGTGGTCGT 
CCTTTACTGA CCCTTTGCAC TTTCGGGAAA TTTCTTTTCA GCGGCCGAGG CTGCAAATAG 
TAGATATAAC AAGTGACACA ATGGAGAGCA GGCCGCGTAA CGCTTCCAAA CTTCTAAAGA 
TTTATAGAAA ACGCGTTGCT CTTTCCTTGT CGATGACTGG TGCAGAAGAA TGCTACCGTT 
AGACTATAGA CGCTGTATTT CTCCCTAGCT AGAGTACGAG AAAACTTGGC TCGGATTTTG 
CGAGCCAATT GTGGAGGCTA TGCTGCGTTT CCACCAGAAC CAAAGCGAGT CTACGAGTTT 
AAGGCGGTGA AGATAAACTC GTTCTATTTT GGCGTAACAA TAGGACTATG TCCTCTCGGT 
TGGACACCAC CGAGGGTCGC CATCAAATCC GAATCTGTAA GGAATCGCAA CAAAACGAAG 
AGTGCCCGTT CGTGAGTATT CGGCTACTGG CTACGAGACG CCTTAGTCCT CTACGAGATC 
TTGCCATCAC AACCGCCCGT AATCCGGTTG AGAAAGTACG GTGCTACGGT GCCGGACTTT 
AACATTTGCA ATTGTAGCAC ACAGGCACAG CCTAATACCG AGCGACGAAA CGGTACGCCA 
GCGGCTGTTG TAAGCATGCG GGCAGAAGTG TCCTAAGACT TCCACTAAAC GGCCAAAACA 
CCAGTCAACA CTGTGTGTTG GGTTGACATT CCAATCATTA TCCATTGTTC TTGGGCTTCT 
CAAACCAACG CTCAAGATCG GAAAACTCGA GCGCCGGTAG AAATCCACCC CATCTCCAGT 
TCAAACACGA GGAGACAGTA CGTACGCATA ATTTCAACGG GAGCAGGCCC CGGTACGGCA 
CTAGAGGTAG CTAGCGGTAA CAGTGTAAGT CTGTTCTGTA TGGAATGTAC GGTAAAAATG 
GACCTACGTA TCCACTACGG GGTGGGATTA ACAGATTGCC AACAAGACAA GGGTACAGAA 
ATGTTTTGGC CCTTCGTGAG GGGCAACATC GAATCCCGAT TGTGACTCAA TCGGGCATTC 
CCACGTCAGG AGGGGGGGAA CGCTCGCTTG GGTAAGGCTA GCAATACACA TACTACGTGC 
CGGCATGGGC AACTTAATAG ACGTGATTTG GGGATAGCGC TCCGTGGTTC AATTCCATGG 
CACGTTAATT TCGACATGGT AACGTCCATG AGTTCGATAC CCGATTTGAA AAAGTTTGAT 
TTGTCGACAC CTTACTCGGG TGGATAAAGA AAGGAGGGGA AGGGGTCATC TCCAGAGTGG 
GGAGGATGGC TCAAGGGCCA AGGAATATCA AGCAGAGAAG ATGTCAAGAT ATAAGTGAAT 
ATGCTTAATA TACCTTAAAT GTGACGAGGT GATAAGACGT GACTTGGGGA GAGCGCTCCG 
TGGTTCAATT CCATGGCACG TTAATTTTGA CAAAAAGACA AAAGAGTAAA GAAGTGTTTT 
GGCCCTTCAG AGGGGCAAAA TCGAATCCCG ATTGTGACTC CATCGGGCAT TCCCCCCGTC 
AGGAGGGGGG AACGCTCGCT TGGGTAAGGC TAGCGATACA ACAACTATTC CTTCCGTGGA 
TGACTTTTTC CCTTATCACT ATCAACTAGA AGAGTACGAA TATATGGATA TGTGAACGAC 
CTTTCTGAGG TCTCTGGGTG GAGTTGCTGA TTTCCCTTAT ATAACGGACA CCAAGAACAA 
CATTTTTATA TCTTCGGCCT GGCCCTGCCA GTACCGTATG ATTTTCATAT CGATATCAAG 
GATGACAGCC GGTTGCACAC AGCATTTCTC GGTCTGTTAT ATTTACCAGC GAAGGCAAGC 
TTATAGATTG TCAACTTTAC CCAAATATCT TGTTCCAAAA TACAAAAGCA GCTGACTTGC 
ACTTAAAAAA ATACTACGTT TCCAATGAAG TTCACATTCC CCTCTCTCCA CCTTGGATTG 
ACTCTCATTT CCTTGGAAAT CCGAGAATTT GATGCTGCGA GAACTGAATT GACCTCGTTT 
ACAACGAAAC TTCGTGGTCG GGTGTTGAAG CAAAAGGTAC AAGTCGTCGG CAACAACGGT 
AACCCAGGTT CTGCGTTTCC GTTGATTGCT TGCCAAGGAG ATTGCGATGT TAACGACGAC 
TGCAAAGGAA TGCTTGAGTG CTTTCATCGG GATGGCGGAG AGGCTGTGCC CGGATGTGGC 
GGCGGAGAGC TTGATTCAAG CCGCACCGAC TTCTGCTATG ATCCCACTGG CGGACCTACG 
CCGGTCACGC CAACCGCTTC CCCTGCTACC CAACTAACTG ATACCCCTGT TGCCCAACCA 
ACCGTTGCTC AACCAACCGC CGGCCCTCCA GTGACTTTTG TCGGGAACAA CGGCGGCCCG 
AGTTCTGTAT TCCCGTTGAT GGCTTGCCAA GGTGACTGCG ATGTTGACGA CGACTGCGAA 
GGAATGCTCG AATGTTTCCA GCGAGATGGC GGAGAGGCTG TGCCCGGATG TGGCGGCGGA 
GAGCTTGATT CAAGCCGCAC CGACTACTGC TATGATCCCA CTGGCGGACC TACGCCGGTC 
ACGCCAACCG CTTCCCCTGC TACCCAACTA ACTGATACCC CTGTTATCCA ACCAACCGTT 
GCTCAACCAA CCGCCGGCCC TCCAGTGACT TTTGTCGGGA ACAACGGCGG CCCGAGTTCT 
GTATTCCCGT TGATGGCTTG CCAAGGCGAC TGCGATGTTG ACGACGACTG CGAAGGAATG 
CTCGAATGTT TCCAGCGAGA TGGTGGAGAG GCCGTGCCCG GATGTGGCGG CGGCGAGCTT 
GATTCGAGCC GCACCGACTA CTGTTTCGAT CCCGCTGGCG GACCTACGCC AGTTACGCCA 
ACCGCTTCCC CTGTTGCCGA TCTGTCGCCT TCCCCTGCTA CCAATCTGTC GCCTTCCCCT 
GCTGTCGATC TGTCGCCTTC TCCTGTTGCC GATCTGTCGC CTACCCCTGT TGCCGATCTG 
TCGCCTACCC CTGTTGCCGA TCCGTCGCCT TCCCCTGTTG CCGA 

 

Protein sequence

MCGGELDSSR TDFCYDPTGG PTPVTPTASP ATQLTDTPVA QPTVAQPTAG PPVTFVGNNG 
GPSSVFPLMA CQGDCDVDDD CEGMLECFQR DGGEAVPGCG GGELDSSRTD YCYDPTGGPT 
PVTPTASPAT QLTDTPVIQP TVAQPTAGPP VTFVGNNGGP SSVFPLMACQ GDCDVDDDCE 
GMLECFQRDG GEAVPGCGGG ELDSSRTDYC FDPAGGPTPV TPTASPVADL SPSPATNLSP 
SPAVDLSPSP VADLSPTPVA DLSPTPVADP SPSPVA