Gene PHATRDRAFT_48570 details

Gene Information

• Locus tag: PHATRDRAFT_48570
• ID: 7194734
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 234991
• End bp: 235623
• Gene Length: 633 bp
• Protein Length: 125 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183055
• Protein GI: 219125581

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0224586
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGGCAAACGG ACGAATCAGC ACCGCAGCGT TGGCCTTGTT TGCTTTCTCA ATCCGCTCCA 
CAAGATCCTT TTCAATAAAT CAAACTTCGT TGACTCGTAA AACCGCAGTC CACTGCCCTT 
TCCTTCTTCG TCCACGTTTA CTTCATACTA CTAGTACTGT ACTCATGGCT ACACCAAAGG 
CGGGAGTCGC CTCCCCCGAA GAGCTCAGCA ATTTTGTCGC CGCGGCAGGC GATAGCCTCG 
TCGTTATCGA CACGCGCAAT CCCGATGCCG AGGCGGAACC CGGTGATCAG AAATCCTTCG 
CTGTTTCGGG ACTGCCCTCC CAGACGCACC GCCCTCAAGC GATCAATTTG ATCTGGGATC 
GCTCCTCGGA TTCCATGCCC TTGCCTGATT TGGAGAAGGA CACACCAATC ATTACTCACT 
GCGGAGGCGG GGGACGCGGA CAGAAAGCCA AGGAATTTCT CGAGAAGAAC GGCTTTACGA 
CTGTCATAAA TGGAGGCGGG CCAAAAGAAG CAGAATGTTG GAATGAGTTT GGAGGAAAAT 
AAGAGTTGCT TGGAATCAAC TCCAAATGCT TTGACAAAAA CGATAGGCGC AGGTAAAATA 
AAGCCATTAT GTAATTACAT GGGTAATATT CTG 

 

Protein sequence

MATPKAGVAS PEELSNFVAA AGDSLVVIDT RNPDAEAEPG DQKSFAVSGL PSQTHRPQAI 
NLIWDRSSDS MPLPDLEKDT PIITHCGGGG RGQKAKEFLE KNGFTTVING GGPKEAECWN 
EFGGK