| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48545 |
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| Symbol | |
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| ID | 7194782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | + |
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| Start bp | 172326 |
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| End bp | 174177 |
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| Gene Length | 1852 bp |
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| Protein Length | 471 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183043 |
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| Protein GI | 219125556 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0458637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGTGCCATTC GCCGATGAGG AAAATTGGAG AGACCTGCTC ACTGTCCGTC AGTCACCACC
TCTTGTCGCT CTTCCTCTTT TGTACTACGA AGTAAAAAGT GAAACGCAAC CAAAAAGGAA
GCCGGATACG CAACAACAAA AAGACCCTAC ACACAACACT GGTGGCTATA CTTACAGTTG
ATTCCTATTG CTGTCAATTG AGCTGATACA CTAGTCAACT TGACAATCCA GACAGAAAGA
AGCATAGATC GAAGGCGCCA GTGCGCCATT CCAGCTGCGC TCTGGCAACA GGTTACGTGT
CTCGCCACTC ATTGGACGAC GTTCCGTCTC GACAGCTCGT CGACTGCGGT TAACAGCCGA
TAACCATCTA GCGCGGAATA CTTTTTCGAC AATGTCAATG CAAATTAGTG GGCGGATACT
CACTTTCACG GTACTGGTGC TCATTCCTAC TGTACTACAA CTCTACGGCA GCTGGCGCAC
CATTCACCAA CTACAACAAA CCCTTTGCCT CGATCCGGAA GAATTTGGTT GTGGTGGTGC
AATCCGTGAG ATTGCCACCG CAATCGATAG TCAAGCAGAA TTGGATGTTT CAACGAAAGA
ACACACCGAT CTCTACGGTT TTGCTGTGCC GACAAAGGAG GAGTCGACGT CGTCCGCAGG
CGCCCACATT ACCTCGCCTC GGCAGTGGCC GACGTCGGAA TCCGTCAACG TGAACACCAA
CCGCACAATA TCTCGGCCTA TCTCCGGCAG CCCACCTACT CTTTTCTGGC ATGTAGGACC
CCACAAAACG TCCACTACCG CCATTCAGAG TTTTCTGGCA GCCCACAAAA AAGTATTGCT
GGAGAAAGAC AACATCGTAT TCCCTTGGAT GCTGCCCGGT CATTTCCGAG GCACCAAAAA
CACAGCCAAT CTCGCGTTTT GTTTGTCAGG ACGAAAGGGA CCATGGGAAA TGAATTGTCA
GCGAGTGCTA CAGTCCTTTC AACACTTTGT CGCAAGTGCA CTGGCAAATT CGAAGAATAT
CGTACTTTCA GCGGAGGAGT TTGCTTTTTG CCACGAACCG CAAATTCGGC AGTTTGTTCA
AGACTACTTT GCCGACTGGG AGATTCAAGT AATTGTTTTC CATCGGCGAT TTGACGAGTG
GCTAACCAGT TTGCATTTTG AAATGAATCG CGACTTACCA TTTCGTGAAC GTTCAAACCT
TGTTGACTTT TTGGAAAACC CAGGCACCTT AGCAAGCTTC GAATTTCACT ACAGCCACAA
AGTTCGTGAA CGGTACCAAT CGGTCACAGA TCACGATGTG ACGATTGTTA ACTTTCACAC
TGCGAAAGAG GGCCGGAGTC TGGTAGAACA ATTTACTTGT GACGGATTGC AAGGAATGGC
ACCGCACACA TGTCGGGCTG CTCAAAGGTT TGTCTCCCGC AAAATTAATG GGGCCCATTC
TTTGGACTCC GGCTTTCTGT TGGCTGAAGC GTTGGAGCAG AACATGGTGC CCTTGCTTGA
TTTCGCCAAC CGGACACTCT CGAGTGACGC AGAGACGTCA TTGCTGGCAA GGATCGATCG
CAAGCTTGAA ACGAGTACAG ATCTCCCGGT TCGCTGTTTG TCAGAGACGA CGCAAGACCA
CGTCTGGAAT CGGACCAAAG AGTGGTTCCC GTTTGACCTA GAAAGGTCAA AGTCGTTATC
AAAAGCCGAA AATGTGTCTC GGTCGAGAAC ATGCTGCTTG GATGTTTCGC GAGTATGCGC
ACTTGACGAC TGGAAGGCGT TTTTCCGAGG ACTGCCTGTG AGTAGGAAAA GTGAGCAAAT
CCAGTAGTCT ATGTTACAAA TTATCCCTAA TAATCAGGAG ACTTTTTCTT GC
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| Protein sequence | MSMQISGRIL TFTVLVLIPT VLQLYGSWRT IHQLQQTLCL DPEEFGCGGA IREIATAIDS
QAELDVSTKE HTDLYGFAVP TKEESTSSAG AHITSPRQWP TSESVNVNTN RTISRPISGS
PPTLFWHVGP HKTSTTAIQS FLAAHKKVLL EKDNIVFPWM LPGHFRGTKN TANLAFCLSG
RKGPWEMNCQ RVLQSFQHFV ASALANSKNI VLSAEEFAFC HEPQIRQFVQ DYFADWEIQV
IVFHRRFDEW LTSLHFEMNR DLPFRERSNL VDFLENPGTL ASFEFHYSHK VRERYQSVTD
HDVTIVNFHT AKEGRSLVEQ FTCDGLQGMA PHTCRAAQRF VSRKINGAHS LDSGFLLAEA
LEQNMVPLLD FANRTLSSDA ETSLLARIDR KLETSTDLPV RCLSETTQDH VWNRTKEWFP
FDLERSKSLS KAENVSRSRT CCLDVSRVCA LDDWKAFFRG LPVSRKSEQI Q
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