Gene PHATRDRAFT_48511 details

Gene Information

• Locus tag: PHATRDRAFT_48511
• ID: 7194763
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 55481
• End bp: 57669
• Gene Length: 2189 bp
• Protein Length: 493 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002183024
• Protein GI: 219125516

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCATTCATT GACGTCGATC GTGTGTTACC AGTTGGCGAC TTTAAGAAGT TGACATTGTC 
AGTAAATCCC ATCCCTTTGT CTCACAGTCA ATCTCTAAAA CCAAACATTG GTGAGAGCTA 
TAAACTCACC GTTTTTGCCC ATTACATCCG ACAGACCTCT TGTACTGTTT GGATTGCTCG 
ACCAAACGAA TCGCTATTGC ATTGTACAGC ACCAGTATAG AAGGCAACAA CCAAAGCAGC 
ATGAGTCCCA AGGAAGAGGA AAAGCAAGAA GAGCCTGTGG ATGCCCCTGC AGTGACGGAG 
CAACAGCGAA AGACAGACGA CGACTACATG GAAACGGTGG ATGTCGAAAA CGGCGAAGAC 
GAGATGGAAG ACGAAATCGA TACGAAAAAG GTTCACATGA GGGTTTCTCC GGACGCACCC 
TGGAAGGAAC GCATGTGGGA AGTCTTTACT ACCTTTTGGC CATTGGGATT GATCGCTTTC 
GGGGGACCCC AGGCGCACGT GGCGATTCTT CGTGATCATT TAGTTGAACA GCGCGATTGG 
TTGGACGAAG AAGCCTTTAC GGAACTCTTC GCAATTGGAC AGGTACGCTA CGTCGCACAA 
ACGTTTTCAT GACCAAAGCA CTCTTACACG CTCACAATCT CTCTTCGCTG TTGAAATATT 
AGGGTCTACC AGGTCCAACC TCCACGCAAC TCGTTATTTC GACAGCACTC AGTCGAGCAG 
GACCTCTGGG CGGCCTCCTG GCATTCTTCC TCTGGAATTT GCCCGGATTG ATTATTTTGA 
CTTTGTGCGG AGCCTTGATT GATGCATTTG TCGATCCTAA TTCTCCACCC TGGTATTTGA 
TAGGTCTACC GCCCGCCGCG ATCTCCCTAG TCTTCAAGGC CTTTTATGGC TTTGCCATTA 
AACTCGATTC GCTAGGTATC ATCCTGGCAC TTTGTAGTTG TCTCGTGGCT ATTGTGCTCA 
ACAATGACGA CGACATTGAT CCGGCCAGTT CGCAGTGGGT CTTTCCCACG ACATTGGCTT 
TAGGAGGTCT CGTTACCTAC CTCGATTCCA AGCGAGAAAA ACCCTTTGCT ACGTACGCCA 
GTCCTGGTAA AGGATGGGAC AAGGATTCCG ACGAAACTAT GAAACGTAAG TCAATTCACG 
AATCAGAATT ATACTTCCGT GGCGTAGCGT GTAATAACGA CTGGCTTACA CTCATCTTGT 
CTTTTTTTCT ACAAATACAG GCATTGGCAT TCCGCTATGG GTTGGTGCCT TGATCTTTCT 
TTTATGGTTG GGCATTTTGA TCCTCGTTAT TATTCTCGTG GATGTGGCCG AAGTCGACAA 
TGTCTATCTC AAGATATTCG AAACCATGTA CCGTATCGGT TCTATCATTT TTGGTGGAGG 
CCAAGTCGTC TTGCCTATGC TTCAGGATGA AGTTGTCCCG GGATGGATGA CCAAGTGAGT 
TAGTGCCTTG CTTACGGAAA ATGTCTGCTC GTATGTGGAA AAAGTTGAGT TGCTTTTGCT 
TAGCCGTGTT CTCACTGTTT GTGTTTTAGG GATCAATTCT TGCAAGGTCT CGGACTCGCG 
CAATCCATGC CTGGTCCGCT ATTCAACTTT TCAGCCTACC TCGGCGCCGT CTACAAGGGC 
GTTCCTGGAG CATTGGTTGC CTACGTTGGC TTATTTGGAC CAGGAGTGAT TCTTATTTTT 
GGAATGGTTC CGTTCTGGGC CCGTCTCCGT CACAACGACA CGTTCAAGGC AGTTTTGAAA 
GGAGTCAACG CAACGGCCAT TGGTTTGGTC GGTGCCGCCT GCGTGACGCT TTGGGAGTCG 
GCCATTTCAG GTGCTGCCGA TGCCATGGTC TTCTCGATCG CGCTCACGAT GGCGGTCGCC 
TTTAGTATTC AAGCCCCCTT TTGTATATTG GCTGGCGGTA TCATTGGTGC CATCATGCAT 
CCTGATGCCC TCGATTTGGG GCAACAGCCG TACTGCGTCG ATCAGGGATT TGCGTTTCCG 
GCGGAATTGT AGTAGCAGAT TCCGAAAAAG TTGGAACCAA TGTCCGGAAC GTGCACATTT 
TAGGTTACAG AGGGCCAGCC GTGTACATCT CTCCGTTCGA TTATTTCAAC ACGTTGATAA 
TGTACCATTG CACGAAGCGT CTACCATACG GTTCATATAT GTGTTCTTTA AAGTTAGGCA 
ATAAACGAAT AGACTCGTCT TGGTTGTTG 

 

Protein sequence

MSPKEEEKQE EPVDAPAVTE QQRKTDDDYM ETVDVENGED EMEDEIDTKK VHMRVSPDAP 
WKERMWEVFT TFWPLGLIAF GGPQAHVAIL RDHLVEQRDW LDEEAFTELF AIGQGLPGPT 
STQLVISTAL SRAGPLGGLL AFFLWNLPGL IILTLCGALI DAFVDPNSPP WYLIGLPPAA 
ISLVFKAFYG FAIKLDSLGI ILALCSCLVA IVLNNDDDID PASSQWVFPT TLALGGLVTY 
LDSKREKPFA TYASPGKGWD KDSDETMKRI GIPLWVGALI FLLWLGILIL VIILVDVAEV 
DNVYLKIFET MYRIGSIIFG GGQVVLPMLQ DEVVPGWMTK DQFLQGLGLA QSMPGPLFNF 
SAYLGAVYKG VPGALVAYVG LFGPGVILIF GMVPFWARLR HNDTFKAVLK GVNATAIGLV 
GAACVTLWES AISGAADAMV FSIALTMAVA FSIQAPFCIL AGGIIGAIMH PDALDLGQQP 
YCVDQGFAFP AEL