Gene PHATRDRAFT_39223 details

Gene Information

• Locus tag: PHATRDRAFT_39223
• ID: 7194925
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 652780
• End bp: 656377
• Gene Length: 3598 bp
• Protein Length: 1161 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183133
• Protein GI: 219125743

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCCTC TTGAACATGT TCTTGTGAAC CTTTTGGGAG CGACGACACC GGATTCGTCG 
TACCGTCGGT TCTTTGAAGA GTACGGTATT ACTCAGACCA GCGAGTTGGC CTCAATCACC 
GAAAATTGTC TTGCAACGGT GTCATATGGT GTTTTGACCC CTTCTGTGGG AGATACCCCT 
GCCACCATTG TTCGTATGTT TCTTCCGCCT GCCCAGCAGG ATCGGATCTT GAAGATTGTC 
AAATGGTTCC TCTCGAAAGG TACCAACGTG ACAAACGAAA CCTGGTTTGA ACTTACCCCT 
GAAGTCCTTG AGTATTGGCA ACCAGCCTCT GCTATTGTTG CCCCTGCTAC TCCTGTTGGA 
TCGGATGCTC GGAGTTCCTT TGTCAAAAGT GCTGCCGCAA AGTTTCGGAA GACAATCAAG 
AATCACTCCG TTCCGTACCC AAAGTTCAGT GAAGACCGTT TTTGGGTCAC TTGGAATACG 
AATATTCGTA TCAAGCTCCG TATCCATGGT GTCCAGTTGG TTCTTGACCC GGATTATTTG 
CCCGAGACCG TCGACGAGAC GGATACATTT GTCGAAATGC AGAACTTTGT CTTTGGCGTG 
TTCAACGATA TATTGTTGAC CCCTCGTGCG CGTGGAATCC TCCACAAGCA TGTGGATGAA 
TTGGATGCTC AGGCTGTTTA CCGCGACCTT GTTGCCTCGT ACGGTAAAGG TATCAATGCG 
CAGATCACTG CCACATCCAT TGAAACGAAG CTCACTTTGT ACTCATTTGC GACTTCAAAG 
AGCAAGACCT GTGTTGCTTT TTTGACGACT TGGCGCAATT TGATTTACGA TCTTGAACGG 
ATCAACGAGT TCCCCTTGCC GGATCACCAG AAGAGCGTAC GACTCAAGTC AGCTGTCCGT 
TCCCATCCGC AATTGAAGCT TTTCCTCGGA AATGTTCAGC TTTACTCTCG TACCCATGTG 
GGTAAGAGTG CCGACGATTC CGATTTTGAG TATGTTTATG ATTTGATGCT CGAACATGCG 
ACTGATATTG ATCAGACCGA TTTGGAAGAC CGCGGTAACA ACCGCGGTGG ATGCTCAGCA 
AACAATGCAA AGTCTCAGTC TTCTTCCAAG AAGAAAACTA ACAAACCAAT TGGTAAGAAG 
CACAAGAATT ATGTGCCTCC TGAAAAGTGA AAAGCTCTCT CTCCCAAAGA GAAGCGGACC 
ATTATGGACC AACGAGGACC TCGCCCTGCT CCAGCTCCTG CCCCTGCCTT ATCGGTGAAC 
GCCGCTGCCA CTCAGCCTCC TCCTACGGTG TATGTCAGCG ACTCGACGGT TGTTGACAAC 
CAAAGCCTCG CTTCGACTCA CGTCCCGCCT GCTGCCGGAC CTGGTCAACT GCTTCGTTCG 
CTCATTTCGA ATTCAGCTGC CCGCCAGCAC CCTGCTCCAT CGAATGGAGC CACGTCTGAC 
TCTTTTTCGG TCAATGGGAC CACCTATCGC AGCGAAGTGA ACCGTTCTTC TGTGCAGTAC 
CGTCTTTCCA CTCACGATGT TTCGTTGAAC AAGGACTCTT TGATCGATGG TGGTGCGAAC 
GGTGGCCTTA GCGGCTCCGA CGTAACCGTT ATTTCGCAAT CCCTGTTGGA GGCCACTGTC 
TCTGGAATTG GAAATTCGGA ATTGACCAAC CTCCGTTTGT CAACGGTGGC CGGACTCATT 
CACACGACGG ATGGTCCCAT TATTGGTGTG TTTCACCAGT ATGCTCACCT TGGTACTGGC 
AATACCATTC ATTCGTGCAA CCAAATGCGC TCCTGGGGAG TCACGGTTGA CGACGTCCCT 
CGTACTTTTG GTGGCAAACA GCGTATTGTC ACGTCCGATG GTCGTTTTGT CATCCCGCTT 
TCCGTTTCTG GCGGACTCAC TTACTTGTCT ATGCAGGCCC CTACCGAGGA GGACCTGGAC 
ACTTTCGAAT GGGTGCCTTT TACCGCTGAC AACGAGTGGG ACCCAAATGG TGTCTCTTCT 
CCTGCCGCTG CCGACAATGA CCTCAGTTTG CAGCTTCCTG CCGGCCATGT CCCGTTCCGT 
GATGAACGCA TCAATAACTT TGGTCTCCTT GCGCATTCCG CGGCTGTCAG TCGATCCCCT 
TTGAATGCCG ATGCTTTGCA ACCCAATTTT GGATGGGTTC CCAGTGCTCG TATCTCTCGC 
ACGTTCGAGA ATACCACACA ATTCGCTCGT GCCGATGTCC GTTTGCCCCT GCGCAAACAT 
TTCAAGTCGC GTTTCCCTGC TGCCAATGTT TCTCGTTTGA ACGAAATTGT GGCAACTGAT 
ACCTTTTTCT CGGATACCCC TGCGGCCGAT GACGGCATTC TTAACCATGG TGGGGCTACG 
ATGGCCCAAC TTTTCGTTGG AAAAAGTTCG CAAATCACCT CTGTCTTCCC GATGAAGCGT 
GAATCCCAGT TTGCCCATAC TTTCGAGGAC TTTATCCGTA CCCATGGTGC TCCCGATGCC 
CTCCTCAGCG ACAATGCTCG TGCTCAGATC GGTCAGCAGG CACTTCAGAT TTTGCGTATG 
TATGCAATCG ACGATATGCA GTGCGAGCCG CATCATCAAC ACCAAAATTA CGCGGAACGC 
CGCATTCAAG AGGTGAAAAA GATGGTGAAC ACAATCATGG ATCGTACAAA CACCCCTCCG 
GAATATTGGT TGCTCTGCTT ATTTTATGTG ACCTACTTGC TCAATCGCCT TGCTGTTGAA 
AGCTTGAATT GGCGTACCCC GCTTCAAGTT GCCCATGGAC AGCGTCCTGA TATTTCTGCT 
TTGCTCCTTT TCCGTTGGTT TGAACCCGTT TATTATTACG ACCCTGACCA TGCGTCTTTC 
CCATCGGCTT CTCGCGAGAA AACTGGTCGT TGGATTGGTG TTGCTGAACA CAAAGGTGAT 
GCGCTGACTT ACTGGATTTT AACCGACAAT ACTCACCAAG CCATTGCTCG TTCTGTTGTT 
CGTTCAGCCA ACGTCGATAA TGGTTTGAAA AACCATCGTG CTGCGAATTC CTCTCCCGAT 
GGTGGGGAGC CTTCGAATCC TAAGCCCATT GTCTTGGCTA CGAGTGACCT ACGCCATGAT 
GCTACGGTCG ATCCATCTTT TGAGAAATCC CCTGCATTCT CTCCTGACGA ATTGATCGGC 
AGGTATTTGA TCCGTGAAGC CCCTGACGGC CAGAGCCATC GAGCCCTTGT TGCTCGTAAA 
ATTATTGATG CCGACTCCGA TAACCATCAG GCGATTTGCT TCTTGTTGCA AATTGATGAA 
AAGGATGCTG ACGAGATCAT TTCGTACAAT GAACTTTCCG ATTTGATGGA AGCCCAACAA 
TCAGAGCCCG CTACGAACGG AAATATCGAA GATCATTTCA AGTTTACTAG TATTATTGGA 
CACCAAGGCC CTTTGCAACC GACCGATGCT GGTTACAAGG GATCCTCTTG GAATGTTTTG 
GTTCAATGGG AAGATGGTTC CCAGTCGTAC GAACCTCTAA TTGAAATGGC TAAGGACGAT 
CCAGTCACAC TCGCGATGTA CGCGTCTGAC AACGATCTCC TTAACGTGCC CGGGTGGCGC 
CGCTTCAATC GTTTGCTTCG CAACCGTGAT GACTTCAATC GATCTGTTTC GTTAGTGA 

 

Protein sequence

MDPLEHVLVN LLGATTPDSS YRRFFEEYGI TQTSELASIT ENCLATVSYG VLTPSVGDTP 
ATIVRMFLPP AQQDRILKIV KWFLSKGTNV TNETWFELTP EVLEYWQPAS AIVAPATPVG 
SDARSSFVKS AAAKFRKTIK NHSVPYPKFS EDRFWVTWNT NIRIKLRIHG VQLVLDPDYL 
PETVDETDTF VEMQNFVFGV FNDILLTPRA RGILHKHVDE LDAQAVYRDL VASYGKGINA 
QITATSIETK LTLYSFATSK SKTCVAFLTT WRNLIYDLER INEFPLPDHQ KSVRLKSAVR 
SHPQLKLFLG NVQLYSRTHV GKSADDSDFE YVYDLMLEHA TDIDQTDLED RGNNRGGCSA 
NNAKSQSSSK KKTNKPIALS PKEKRTIMDQ RGPRPAPAPA PALSVNAAAT QPPPTVYVSD 
STVVDNQSLA STHVPPAAGP GQLLRSLISN SAARQHPAPS NGATSDSFSV NGTTYRSEVN 
RSSVQYRLST HDVSLNKDSL IDGGANGGLS GSDVTVISQS LLEATVSGIG NSELTNLRLS 
TVAGLIHTTD GPIIGVFHQY AHLGTGNTIH SCNQMRSWGV TVDDVPRTFG GKQRIVTSDG 
RFVIPLSVSG GLTYLSMQAP TEEDLDTFEW VPFTADNEWD PNGVSSPAAA DNDLSLQLPA 
GHVPFRDERI NNFGLLAHSA AVSRSPLNAD ALQPNFGWVP SARISRTFEN TTQFARADVR 
LPLRKHFKSR FPAANVSRLN EIVATDTFFS DTPAADDGIL NHGGATMAQL FVGKSSQITS 
VFPMKRESQF AHTFEDFIRT HGAPDALLSD NARAQIGQQA LQILRMYAID DMQCEPHHQH 
QNYAERRIQE VKKMVNTIMD RTNTPPEYWL LCLFYVTYLL NRLAVESLNW RTPLQVAHGQ 
RPDISALLLF RWFEPVYYYD PDHASFPSAS REKTGRWIGV AEHKGDALTY WILTDNTHQA 
IARSVVRSAN VDNGLKNHRA ANSSPDGGEP SNPKPIVLAT SDLRHDATVD PSFEKSPAFS 
PDELIGRYLI REAPDGQSHR ALVARKIIDA DSDNHQAICF LLQIDEKDAD EIISYNELSD 
LMEAQQSEPA TNGNIEDHFK FTSIIGHQGP LQPTDAGYKG SSWNVLVQWE DGSQSYEPLI 
EMAKDDPVTL AMYASDNDLL N