| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39165 |
|---|
| Symbol | |
|---|
| ID | 7194845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011686 |
|---|
| Strand | - |
|---|
| Start bp | 479271 |
|---|
| End bp | 480074 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183232 |
|---|
| Protein GI | 219125951 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.863168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACTG GATTGCTTGC CGTCATCTTC CTCTTCCTCG AACGCTGGCG CCATTACCAG
GCCTTGACAC AAACGTCGTT TCGACCGCAG CACCACAGGT TAACGCAACG AGCGCCCCCA
TCCGCACTCT TTGCCACAGA ACGAACACAC ACAACGCGCG CCGTCTTTCT CGCGACGTGT
GTTGCCTCGG TGACGTTTCC CGGACACGCC TTTGACGGCG GTGTTGGAGG TCTCGGAAAG
ACTCGACCCG AAACGGGTGT ACTTTTCTTT CCGGGATCAT CTCCGTTCCA AAATGCGGAC
GGTCTCGTCA CGGCCGAGTT GGTGACGGCC GGCGCCTCCA ATCAACCCTA CCGTGTCAGC
TTTCGTACCC CGTGGCCACT GTTGCCGACC ACAACAGGTC TCGAATCACG TGACTTGCAA
ACATCCGAGT CTGCCTTTGT ACAGGTGCTG GAAAATACCC CGCTGCCGAC GTCCACCGCG
AATTTTGCCA CGCTTGTACA GAATTCCGTG CTGGCGTCAC AAGGCAAGTT TGGTGCCTAC
GGCAGTCCGA CCGACGTGAA AGTGAAACGA CTAGACTCGG CCGTCGGCAC CGGGTTGACG
TATTCCGTCC GCTTTGTTGC TTTGACTCCC GGTCAACGAG AAAGTGAGCG GCAACTGCTG
ATCCGGTGCG TCCCGATTGC GGACAGCTTG GTGTTGCTCC TGGCCGGCAC GACGCGACAG
CGATTTGCCA CACAACAAGG CACGCTGCGG GACATTATCG ATAGCCTGGA AGTCGTACCC
ACTCCCGTCC GGCCGCTACG CTAA
|
|---|
| Protein sequence | MRTGLLAVIF LFLERWRHYQ ALTQTSFRPQ HHRLTQRAPP SALFATERTH TTRAVFLATC
VASVTFPGHA FDGGVGGLGK TRPETGVLFF PGSSPFQNAD GLVTAELVTA GASNQPYRVS
FRTPWPLLPT TTGLESRDLQ TSESAFVQVL ENTPLPTSTA NFATLVQNSV LASQGKFGAY
GSPTDVKVKR LDSAVGTGLT YSVRFVALTP GQRESERQLL IRCVPIADSL VLLLAGTTRQ
RFATQQGTLR DIIDSLEVVP TPVRPLR
|
|---|
| |