Gene PHATRDRAFT_39129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39129 
Symbol 
ID7194883 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp391148 
End bp392233 
Gene Length1086 bp 
Protein Length294 aa 
Translation table 
GC content42% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183087 
Protein GI219125648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.071399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCA CTAGTTCAAT TGTGTCCCTT CTTGCCCTCT CTGGCATGTC GCTAGTATGT 
GCTTCCCCAG CAATCAACAC ACTCAGAGTA AAACCAGGGG ATGTCTTTGC TGTGACTTTA
CAAAACAACC TTCCTGCAGG TTCTAGCTTA GATCGTGAGT TGTACAACTA TGTGATGGAT
CCAGTAAATG AAGCAAACAA TGAAGCCAAT GTAACGATTG TTTTCAATCG ACTTGCCGCC
AACGGCAACA TTCACCTTCC AGAGTATGGC TTTTGGGGTT TGAGCTACAA CAACCTTCAC
TTTCATGGGT AAGTGCGCTA AAGAAATATT GTGTTGTGTG AGAGCTGGCC AGTCAGGATA
GGAGTAAATG CCATACTCTG ACCGACATAG TTTGTGCGTG TTTCCACAGT GCCATGTTTT
CGCCATCTCT GGAAAATATT GACCAAGTGG TTGATGGAGG AGAATCGAAA ACTTACACCT
TTAAAATTCC AGAAGACGCT CAATCTGGAG TGGTGTGGTA TCATAATCAT GTGCACGGCG
TAAGTTGGCT AGTCAATCTT CTTAGAAAGC ATGTCTACTC ACTGAGCATG AAACTTACTC
TAATTTTGTC TGCTGCAACA AATGATGTCC ATTTGAAAGA CGTCTGTGTA TTCGTACCTT
GCTTCCTTGT TTGGATTCAT GGTAATTGAA GGCACAGATA ATGATATTTC CAATGCTCCA
GGAATTTCTG GATCTACTGA AGTGCTGATG CTACGTTCGG AAGGCCTTGT TAATGATGAC
AAGTCTATAC CTATGTTTTT TCCAATTACT GGGCAGTTCA ACTGGAATTC CGTTGCAAAT
GGAAATCTAG GACAGGAAAC AACGTATGCA TTTACTCAAC ATGAAACAAT CTTCTTTCGA
GTGGCATCTG CAACAACCGA ACCAACTATT AGTCTTGTGA TCCCAAATAT TTCCTTTGTG
GTTGTTGGCT ATGATGGTCT ACCATTGCCA GAACCAATAG AAACTGATAC AGTTGTAGTC
GGAGGCGGAG GCAGAGTGGA ATTTTTGGTA CGCTTTGATG AGCCAGGAAC ATATGAGATG
AGCTGA
 
Protein sequence
MSFTSSIVSL LALSGMSLVC ASPAINTLRV KPGDVFAVTL QNNLPAGSSL DRELYNYVMD 
PVNEANNEAN VTIVFNRLAA NGNIHLPEYG FWGLSYNNLH FHGAMFSPSL ENIDQVVDGG
ESKTYTFKIP EDAQSGVVWY HNHVHGTSVY SYLASLFGFM VIEGTDNDIS NAPGISGSTE
VLMLRSEGLV NDDKSIPMFF PITGQFNWNS VANGNLGQET TYAFTQHETI FFRVASATTE
PTISLVIPNI SFVVVGYDGL PLPEPIETDT VVVGGGGRVE FLVRFDEPGT YEMS