Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39129 |
Symbol | |
ID | 7194883 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 391148 |
End bp | 392233 |
Gene Length | 1086 bp |
Protein Length | 294 aa |
Translation table | |
GC content | 42% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183087 |
Protein GI | 219125648 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.071399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTCA CTAGTTCAAT TGTGTCCCTT CTTGCCCTCT CTGGCATGTC GCTAGTATGT GCTTCCCCAG CAATCAACAC ACTCAGAGTA AAACCAGGGG ATGTCTTTGC TGTGACTTTA CAAAACAACC TTCCTGCAGG TTCTAGCTTA GATCGTGAGT TGTACAACTA TGTGATGGAT CCAGTAAATG AAGCAAACAA TGAAGCCAAT GTAACGATTG TTTTCAATCG ACTTGCCGCC AACGGCAACA TTCACCTTCC AGAGTATGGC TTTTGGGGTT TGAGCTACAA CAACCTTCAC TTTCATGGGT AAGTGCGCTA AAGAAATATT GTGTTGTGTG AGAGCTGGCC AGTCAGGATA GGAGTAAATG CCATACTCTG ACCGACATAG TTTGTGCGTG TTTCCACAGT GCCATGTTTT CGCCATCTCT GGAAAATATT GACCAAGTGG TTGATGGAGG AGAATCGAAA ACTTACACCT TTAAAATTCC AGAAGACGCT CAATCTGGAG TGGTGTGGTA TCATAATCAT GTGCACGGCG TAAGTTGGCT AGTCAATCTT CTTAGAAAGC ATGTCTACTC ACTGAGCATG AAACTTACTC TAATTTTGTC TGCTGCAACA AATGATGTCC ATTTGAAAGA CGTCTGTGTA TTCGTACCTT GCTTCCTTGT TTGGATTCAT GGTAATTGAA GGCACAGATA ATGATATTTC CAATGCTCCA GGAATTTCTG GATCTACTGA AGTGCTGATG CTACGTTCGG AAGGCCTTGT TAATGATGAC AAGTCTATAC CTATGTTTTT TCCAATTACT GGGCAGTTCA ACTGGAATTC CGTTGCAAAT GGAAATCTAG GACAGGAAAC AACGTATGCA TTTACTCAAC ATGAAACAAT CTTCTTTCGA GTGGCATCTG CAACAACCGA ACCAACTATT AGTCTTGTGA TCCCAAATAT TTCCTTTGTG GTTGTTGGCT ATGATGGTCT ACCATTGCCA GAACCAATAG AAACTGATAC AGTTGTAGTC GGAGGCGGAG GCAGAGTGGA ATTTTTGGTA CGCTTTGATG AGCCAGGAAC ATATGAGATG AGCTGA
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Protein sequence | MSFTSSIVSL LALSGMSLVC ASPAINTLRV KPGDVFAVTL QNNLPAGSSL DRELYNYVMD PVNEANNEAN VTIVFNRLAA NGNIHLPEYG FWGLSYNNLH FHGAMFSPSL ENIDQVVDGG ESKTYTFKIP EDAQSGVVWY HNHVHGTSVY SYLASLFGFM VIEGTDNDIS NAPGISGSTE VLMLRSEGLV NDDKSIPMFF PITGQFNWNS VANGNLGQET TYAFTQHETI FFRVASATTE PTISLVIPNI SFVVVGYDGL PLPEPIETDT VVVGGGGRVE FLVRFDEPGT YEMS
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