Gene PHATRDRAFT_39095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39095 
Symbol 
ID7194812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp318214 
End bp319230 
Gene Length1017 bp 
Protein Length338 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183202 
Protein GI219125887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAG CCTTCGCTGG TGCTTTACAG GCTGAATGGA ATGAACGTAA GCCTTCGCAT 
CGTATCACGC CGAAACGATC GGGGCACGTG GCGTTTCCGA GTCCCCATTC TTCGGATGTC
TATATTTTTG GAGGTTACGC CGAAGAGAGT CCTTCCAATC GCTACGTGAC GAACGATCTG
TGGCGGTGGA ACAGTGAACA ACAGGACTGG GAATCTGTTG GGACCAACGG AGAATCCCCG
CGGGCTCGAC TAGTGGCGGC CGCGGCCGTC TTGGCAGGCA AGAGTGACCG TTCGCAACAC
TTTCGTGCTT ACGTTTTTGG AGGGTGGGAT CCCGGTACCA AACAAGATGG TGGTGATATT
CTAGAGACAA TCCATCGTTT GGATTTCGGT CGGGACCAGG ATAGCGGAAC AACTAATCCT
ACGTGGGCGC ACTTGGACGT TGTTACGCCA GGTGGGCCCA CCTCTCGACA CGTCGCGGTC
GCCATACCGG AACGGAATCA AATTGTTCTG CATAACCACC GATGCCACGA TATGGTATGG
ATCTTTGACG CCGACCGTGA AAGCTTTGTC CAACAAACGA CATCTGGACC GTGCCCTAGT
GCCCGCGGTT TGCACTCGGC AACCCTATCG AGCAAGCATG AGATTGTGTT TTTTGGTGGT
GCCTCGCAGG ATCAAACCAT GTCCAACGAA GTCTTTGTAC TTGATACAAA ATCTTGGACG
TGGAGGAAGC TGATGGACAA CGAAAAGAAG GCTCCATCCC CACGAGCATC TCCTTGCCTG
TGCCGGTGGT CCGACGACAT TGTCTTGGTC TACGGTGGTG CAGAGTCCAG TAGTCTGGGA
CTTACTCCTC GCAGCGATGT TTGGGCGTTG GATTTGAGGA AAGAAACGTG GAACTGTTTG
TTGCCGGATG ATCAGCCAGC GTCGACATTT TGTCCTCCGG CTCGCAACGC CGCCACGTTG
GTGGAAATGT CGAGCTCCGA AAACGGAAAA GAATATTTGC TGACGGGAGG ATGGTAA
 
Protein sequence
MSTAFAGALQ AEWNERKPSH RITPKRSGHV AFPSPHSSDV YIFGGYAEES PSNRYVTNDL 
WRWNSEQQDW ESVGTNGESP RARLVAAAAV LAGKSDRSQH FRAYVFGGWD PGTKQDGGDI
LETIHRLDFG RDQDSGTTNP TWAHLDVVTP GGPTSRHVAV AIPERNQIVL HNHRCHDMVW
IFDADRESFV QQTTSGPCPS ARGLHSATLS SKHEIVFFGG ASQDQTMSNE VFVLDTKSWT
WRKLMDNEKK APSPRASPCL CRWSDDIVLV YGGAESSSLG LTPRSDVWAL DLRKETWNCL
LPDDQPASTF CPPARNAATL VEMSSSENGK EYLLTGGW