Gene PHATRDRAFT_39076 details

Gene Information

• Locus tag: PHATRDRAFT_39076
• ID: 7194801
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 267566
• End bp: 271163
• Gene Length: 3598 bp
• Protein Length: 1175 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183062
• Protein GI: 219125596

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.455166
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCCTC TCGAGCATGT CCTTGTGAAC CTTTTGGGAG CGACAACGCT GGATTCGTCG 
TACCGTCGGT TCTTTGAAGA GTATGGCATT ACTCAGGCCA GTGAATTGGC CTCAATCACT 
GAACATCGTC TTGCAACGGT GTCTTACGGC GTCTTGACCC CTGCTGTGGG AGACGGCCCT 
GCTGCAATTG TTCGTACATT CCTTCCGCCT GCGCAACAGG ACCGGATTTT GAAGATTGTA 
CAATGGTTCC TTTCGAAAGG CACCAATGTG ACAAACGACA CCTGGCTTGA ACTTACCTCT 
GATGTTCTCG AGTATTGGCA ACCCGCCTCT GCTACTGTTG CCCCAGCTAC TCCTGTTGGA 
TCGGATGCTC GAAGTTCCTT TGTTGAAAGT GCTGCCGCGA AATTTCGGAA GACGATCAAA 
AATCATTCCG TCCCGTATCC AAAGTTCAGT GAAGACCGTT TTTGGGTCAC TTGGAATACG 
AATATTCGTA TCAAGCTCCG TATTCATGGT GTTCAGTTGG TACTTGACCC GGATTATTTG 
CCTGAGACCG TCGACGAGAC GGATACGTTT GTTGAAATGC AGAACTTTGT CTTTGGCGTT 
TTCAACGATA TTTTGTTGAC CCCTCGTGCG CGTGGAATCC TCCACAAGCA TGTGGATGAG 
CTGGATGCTC AGTCGGTCTA CCGCGACCTT GTTGCCTCGT ACGGCAAAGG TATTAACGCG 
CAGATCACGG CCACATCCAT TGAAACGAAA CTTACTTTGT ATTCATTTGC GACTTCAAAG 
AGCAAGACCT GTGTTGCTTT TTTGACGACC TGGCGCAATT TGATTTACGA TCTTGAACGG 
ATCAACGAGT TCCCTTTGCC GGATCACCAG AAGAGCGTAC GACTGAAGTC AGCTGTCCGT 
TCCCATCCGC AATTGAAACT TTTCCTCGGA AATGTTCAAC TTTACTCTCG TACCCATGTG 
GGTAAGAGTG CTGATGATTC CGATTTCGAG TATGTTTATG ATTTGATGCT TGAACATGCA 
ACTGATATTG ATCAGACCGA TTTGGAAGAC CGCGGTAACA ACCGTGGTGG ACGCTCAGCA 
AACAATGCGA AGTTCCAGTC TTCTTCCAAG AAGAAAACTA ACAAACCGAT TGGTAAGAAG 
CACAAGAATT ATGTGCCTCC TGAGAAGTGG AATGCTCTCT CTCCCGAAGA GAAGCGGACC 
ATTATGGATC AACGAGGACC TCGCCCTGCT CCAGCCCCTG CCCCTGCCTT ATCGGTGAAC 
GCCGCTGCCA CTCAGCCCCC TCCTACGGTG TATGTCAGTG ACTCGACGGC TGTTGACAAC 
CAAAGCCTTG CTTCGACCCA CGTCCCACCT GCTGCTGGAC CTGGTCACCT GCTTCGTTCG 
CTCATTTCGA ATTCAGCTGC CCGCCAGCAC TCTGCCCCAT CGAATGGAGC CACGTCTGAC 
TCTTTTTCGG TCAATGGGAC CACCTATCGC CGCGAAGTGA ACCGTGCTTC TGTGCAGTAC 
CGTCTTTCCA CTCACGATGT TTCGTTGAAT AAGGACTCTT TGGTCGATGG TGGTGCCAAC 
GGTGGCCTTA GCGGCTCAGA CGTAACCGTT ATTTCGCAAT CCCTGTCAGA GGCAACTGTC 
TCTGGAATTG GAAATTCGGA ATTGACCAAC CTCCGTTTGT CAACAGTGGC CGGACTCATT 
CACACGACGG ATGGTCCCAT TATTGGTGTG TTTCACCAGT ATGCTCATCT TGGTACTGGT 
AATACCATCC ACTCGTGCAA CCAAATGCGC TCCTGGGGAG TCACGGTTGA CGACGTCCCT 
CGTACTTTTG GTGGCAAACA GCGTATTGTC ACGTCCGATG GTCGTTTTGT CATCCCGCTT 
TCGGTTTCTG GCGGACTCAC TTACTTGTCT ATGCAGGCCC CTACCGAGGA GGACCTGGAC 
ACTTTCGAAT GGGTGCCTTT TACCGCTGAC AACGAGTGGG ATCCAAATAG TCTCTCTTCT 
CCTGCCGCTG CCGACGATGA CCTCAGTTTG CAGCTTCCTG TCGGCCATGT TCCGTTCCGT 
GACGAACGCA TCAACAACTT TGGTCTCCTT GCGCATTCCG CGGCAGTCAG TCGATCCCCT 
TTGAATGTCG ATGCTTTGCA ACCCAATTTT GGATGGGTTC CCAGTGCTCG TATCGCTCGT 
ACGTTTGAAA ATACCACGCA ATTTGCTCGT GCCGATGCCC GTTTGCCCTT GCGCAAACAC 
TTCAAATCGC GTTTCCCTGC TGCCAATGTC TCTCGTCTGA ACGAAATTGT GGCAACCGAT 
ACTTTTTTCT CGGATACCCC TGCGGCCGAT GACGGCATTT TTAACCATGG TGGGGCTACG 
ATGGCCCAAC TTTTCGTTGG AAAAAGTTCG CAAATCACCT CTGTCTTCCC GATGAAGCGC 
GAGTCTCAGT TTGCCCATAC TTTCGAGGAT TTTATCCGTA CCCATGGTGC TCCCGATGCC 
CTCCTCAGCG ACAATGCCCG TGCTCAGATC GGTAAGCAGG CACTTCAGAT CTTGCGCATG 
TATGCGATCG ACGACATGCA GTGCGAGCCG CATCATCAGC ACCAAAATTA CGCGGAACGC 
CGCATTCAAG AGGTGAAAAA GATGGTGAAC ACAATCATGG ATCGTACAAA CACTCCTCCT 
GAATATTGGT TGCTCTGCTT ATTTTATGTG ACCTACTTGC TCAATCGCCT CTCTGTCGAA 
AGCTTGAATT GGCGTACCCC GCTTCAGGTT GCCCATGGAC AGCGTCCCGA TATTTCTGCT 
TTGCTCCTTT TTCGTTGGTT TGAGCCCGTT TATTATTACG ACCCTGACCA TGCGTCTTTC 
CCATCGCATT CTCGCGAGAA AACTGGTCGT TGGATTGGTG TCGCCGAACA TAAAGGTGAT 
GCGCTGACTT ATTGGATTTT GACAGACAAT ACTCACCAGG CCATTGCTCG TTCTGTTGTT 
CGTCCAGCCA ATGTCGATAA TGGTTTGAAA AACCATCGTG CTGCGGATTC CTCTCCCGAT 
GGTGGGGAGC CCTCGAATCC TAAGCCCATT GTCTTGGCTA CGAGTGACCT ACGCCATGAC 
GCTACGATTG ATCCATCTTT TGAGAAATCC CATGCATTCT CTCCTGACGA ATTGATCGGC 
AGATATTTGA TTCGTGAAGC CCCTGACGGC CAGAGCCATC GAGCCCTTGT TGCTCGTAAA 
ATTATTGATG CCGACTCCGA TAACCACCAG GCAATCCGCT TCTTGTTGCA AATTGATGAA 
AAGGATGCTG ACGAGATCAT TTCGTACAAT GAACTCTCCG ATTTGATGGA AGCCCAACAA 
TCAGAGCCCG CTACGAACGG AAATATCGAA GATCATTTCA AGTTTACTAG TATTATTGGA 
CACCAAGGCC CTTTGCAACC GACCGATGCG GGCTACAAGG GATCCTCTTG GAATGTTTTG 
GTTCAATGGG AAGATGGTTC CCAGTCGTAC GAACCTCTAA TTGAAATGGC AAAGGACGAT 
CCAGTCACAC TCGCGATGTA CGCGTCTGAC AACGATCTTC TTAACGTGCC CGGGTGGCGC 
CGCTTCAATC GTCTGCTTCG CAACCGTGAT GACTTCAATC GATCTGTTTC GTTAGTGA 

 

Protein sequence

MDPLEHVLVN LLGATTLDSS YRRFFEEYGI TQASELASIT EHRLATVSYG VLTPAVGDGP 
AAIVRTFLPP AQQDRILKIV QWFLSKGTNV TNDTWLELTS DVLEYWQPAS ATVAPATPVG 
SDARSSFVES AAAKFRKTIK NHSVPYPKFS EDRFWVTWNT NIRIKLRIHG VQLVLDPDYL 
PETVDETDTF VEMQNFVFGV FNDILLTPRA RGILHKHVDE LDAQSVYRDL VASYGKGINA 
QITATSIETK LTLYSFATSK SKTCVAFLTT WRNLIYDLER INEFPLPDHQ KSVRLKSAVR 
SHPQLKLFLG NVQLYSRTHV GKSADDSDFE YVYDLMLEHA TDIDQTDLED RGNNRGGRSA 
NNAKFQSSSK KKTNKPIGKK HKNYVPPEKW NALSPEEKRT IMDQRGPRPA PAPAPALSVN 
AAATQPPPTV YVSDSTAVDN QSLASTHVPP AAGPGHLLRS LISNSAARQH SAPSNGATSD 
SFSVNGTTYR REVNRASVQY RLSTHDVSLN KDSLVDGGAN GGLSGSDVTV ISQSLSEATV 
SGIGNSELTN LRLSTVAGLI HTTDGPIIGV FHQYAHLGTG NTIHSCNQMR SWGVTVDDVP 
RTFGGKQRIV TSDGRFVIPL SVSGGLTYLS MQAPTEEDLD TFEWVPFTAD NEWDPNSLSS 
PAAADDDLSL QLPVGHVPFR DERINNFGLL AHSAAVSRSP LNVDALQPNF GWVPSARIAR 
TFENTTQFAR ADARLPLRKH FKSRFPAANV SRLNEIVATD TFFSDTPAAD DGIFNHGGAT 
MAQLFVGKSS QITSVFPMKR ESQFAHTFED FIRTHGAPDA LLSDNARAQI GKQALQILRM 
YAIDDMQCEP HHQHQNYAER RIQEVKKMVN TIMDRTNTPP EYWLLCLFYV TYLLNRLSVE 
SLNWRTPLQV AHGQRPDISA LLLFRWFEPV YYYDPDHASF PSHSREKTGR WIGVAEHKGD 
ALTYWILTDN THQAIARSVV RPANVDNGLK NHRAADSSPD GGEPSNPKPI VLATSDLRHD 
ATIDPSFEKS HAFSPDELIG RYLIREAPDG QSHRALVARK IIDADSDNHQ AIRFLLQIDE 
KDADEIISYN ELSDLMEAQQ SEPATNGNIE DHFKFTSIIG HQGPLQPTDA GYKGSSWNVL 
VQWEDGSQSY EPLIEMAKDD PVTLAMYASD NDLLN