Gene PHATRDRAFT_39066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39066 
Symbol 
ID7194796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp243756 
End bp244733 
Gene Length978 bp 
Protein Length325 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183057 
Protein GI219125585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.380763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACTC TTCCTTCTGA AGGTTCAATC GTGTGCGGTG AAATCGTTCG AATTGAACCG 
TATGGAGCCT TCGTGCAGTT GGAAGAATGT CGAGCTCGGG GGCTTTTGCA CATCTCTCAA
ATTGCGAACA TGAGGTTGGA AAAAGTTGAG GATGCACTAT CAATGAACGA TCGTGTGTGG
GTCAAAGTTT TGGAGGTAGT ACCCGACGAC AATCCAGACA TGTCCCGTCC GCAACGCTTC
AAAATAAAGC TCACCATGAA AAATGTTGCT CAAGATGGTA CAGCTCAAGA AATAGAGGCA
TCGCTACAAG CTGGTCAAAG AGTATCACAA GCAATTGAAC AAAACTTGAA TTCCAAGATT
GGAATGGGTG TAGCACGAGA TCCAATGGCT GGTTACAGCA ACGCGAGCGA TCGTTTGATT
TTGAAAAATG ATCCTTCCCG GAAGACGACT GTAATAAATG GGTACGCGCT AGTGGACGAT
ACCGAAGGAG TACTTCCTCC GGAGTCATCG CTGCCTCCCT TAATCGAGCC AGTACAAATT
GTATTAATGG GCCGTGGGCG CGGAAAAACG TTGCCGGCAT GGATGACCAA TGACGACAAC
GGCCCGATCA AGCGTTCCGA GATGGTAGTC AACGATGACG GAAGCTCATC CAACGAAAGT
GGACGACATT CTAGAAAACG CAGCAAACGC AAAAGCAAAG AAAAGCGCAA AAAGGATAGA
AAGCGTTCTC GAAAGACTCG ATATAACGAC GAAAGTGAGA GGGACGACCG AGACCGCGAT
AGACATCGAA AAAAACGCCG TCGAAGCCAG CGTAGTCGCA GCCCAAGCGC CAGTGCTAAA
AGCTCCATCC CTGATGAGGG TTTTTTCAAT CGGTCATTAG GGGATGATAG AAACATCAGC
TTTCGGAATG TGGACGAAGC GAAGCGCCTA GTAGAAGAGT TGGAGAAAAA AGGAGTTCGC
AAAAGTCGGC GGTCGTAG
 
Protein sequence
MQTLPSEGSI VCGEIVRIEP YGAFVQLEEC RARGLLHISQ IANMRLEKVE DALSMNDRVW 
VKVLEVVPDD NPDMSRPQRF KIKLTMKNVA QDGTAQEIEA SLQAGQRVSQ AIEQNLNSKI
GMGVARDPMA GYSNASDRLI LKNDPSRKTT VINGYALVDD TEGVLPPESS LPPLIEPVQI
VLMGRGRGKT LPAWMTNDDN GPIKRSEMVV NDDGSSSNES GRHSRKRSKR KSKEKRKKDR
KRSRKTRYND ESERDDRDRD RHRKKRRRSQ RSRSPSASAK SSIPDEGFFN RSLGDDRNIS
FRNVDEAKRL VEELEKKGVR KSRRS