Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39066 |
Symbol | |
ID | 7194796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 243756 |
End bp | 244733 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183057 |
Protein GI | 219125585 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.380763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACTC TTCCTTCTGA AGGTTCAATC GTGTGCGGTG AAATCGTTCG AATTGAACCG TATGGAGCCT TCGTGCAGTT GGAAGAATGT CGAGCTCGGG GGCTTTTGCA CATCTCTCAA ATTGCGAACA TGAGGTTGGA AAAAGTTGAG GATGCACTAT CAATGAACGA TCGTGTGTGG GTCAAAGTTT TGGAGGTAGT ACCCGACGAC AATCCAGACA TGTCCCGTCC GCAACGCTTC AAAATAAAGC TCACCATGAA AAATGTTGCT CAAGATGGTA CAGCTCAAGA AATAGAGGCA TCGCTACAAG CTGGTCAAAG AGTATCACAA GCAATTGAAC AAAACTTGAA TTCCAAGATT GGAATGGGTG TAGCACGAGA TCCAATGGCT GGTTACAGCA ACGCGAGCGA TCGTTTGATT TTGAAAAATG ATCCTTCCCG GAAGACGACT GTAATAAATG GGTACGCGCT AGTGGACGAT ACCGAAGGAG TACTTCCTCC GGAGTCATCG CTGCCTCCCT TAATCGAGCC AGTACAAATT GTATTAATGG GCCGTGGGCG CGGAAAAACG TTGCCGGCAT GGATGACCAA TGACGACAAC GGCCCGATCA AGCGTTCCGA GATGGTAGTC AACGATGACG GAAGCTCATC CAACGAAAGT GGACGACATT CTAGAAAACG CAGCAAACGC AAAAGCAAAG AAAAGCGCAA AAAGGATAGA AAGCGTTCTC GAAAGACTCG ATATAACGAC GAAAGTGAGA GGGACGACCG AGACCGCGAT AGACATCGAA AAAAACGCCG TCGAAGCCAG CGTAGTCGCA GCCCAAGCGC CAGTGCTAAA AGCTCCATCC CTGATGAGGG TTTTTTCAAT CGGTCATTAG GGGATGATAG AAACATCAGC TTTCGGAATG TGGACGAAGC GAAGCGCCTA GTAGAAGAGT TGGAGAAAAA AGGAGTTCGC AAAAGTCGGC GGTCGTAG
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Protein sequence | MQTLPSEGSI VCGEIVRIEP YGAFVQLEEC RARGLLHISQ IANMRLEKVE DALSMNDRVW VKVLEVVPDD NPDMSRPQRF KIKLTMKNVA QDGTAQEIEA SLQAGQRVSQ AIEQNLNSKI GMGVARDPMA GYSNASDRLI LKNDPSRKTT VINGYALVDD TEGVLPPESS LPPLIEPVQI VLMGRGRGKT LPAWMTNDDN GPIKRSEMVV NDDGSSSNES GRHSRKRSKR KSKEKRKKDR KRSRKTRYND ESERDDRDRD RHRKKRRRSQ RSRSPSASAK SSIPDEGFFN RSLGDDRNIS FRNVDEAKRL VEELEKKGVR KSRRS
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