Gene PHATRDRAFT_39040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39040 
Symbol 
ID7194721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp193386 
End bp193916 
Gene Length531 bp 
Protein Length176 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183173 
Protein GI219125826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTCC TGCATTCTAT TTTTCTTTTC TTGGTGTTCG TTAGCATGCC CAGAGTTGCC 
CGGTCGTGGT CCTCCACGTC TCCGAACCGC ATGGAAAGTC TCGTCCGCCA GTACTTTGAA
GGCGTCAACC AACAGGATCC GGAAATGATC CGCAGATGCT TCGGCGAGAC CGCCACCATA
TGGGACGTTT GCGGTATAAA CAGCTCAAGG AGAACTGTGA AAGCAAAAGA TTTGGTGGAT
CGGTGTATGG ACTTCGTCAC GGCGCATCCT GATTGCGTGG TCAAGTTTCA TTACGGACCT
GAGTGTGGCC GGACGTCTGG TTGGGTGGTA GCGCACTGGT ACGAAACTGG AACATGGACA
GGCGAAAGCT GCGGTTTGGT CCCAACGAAC GAACACATGG CCGTCGAAGG GCAAACCAGG
TTTTTGGTAG ACGAAACAGA ACTTAAAATC AAGGAGTTTG TAGTCACTCG AACGTATACT
GATTGGGAAA AGACATTGCT GGAAAAACAA CAAAACGATT CTCAAACCTA G
 
Protein sequence
MVFLHSIFLF LVFVSMPRVA RSWSSTSPNR MESLVRQYFE GVNQQDPEMI RRCFGETATI 
WDVCGINSSR RTVKAKDLVD RCMDFVTAHP DCVVKFHYGP ECGRTSGWVV AHWYETGTWT
GESCGLVPTN EHMAVEGQTR FLVDETELKI KEFVVTRTYT DWEKTLLEKQ QNDSQT