| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38995 |
|---|
| Symbol | |
|---|
| ID | 7194698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011686 |
|---|
| Strand | + |
|---|
| Start bp | 60037 |
|---|
| End bp | 61223 |
|---|
| Gene Length | 1187 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183025 |
|---|
| Protein GI | 219125519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGA AGCTTCAAGG TTACAAGAAG AACTACTCCA ACGTTATTCT GATGATTGTT
TTAACGCACA CGATCGTCAA CATAATCTGG AGACGTCCAC TCAATGAGCT TAGATTTCCA
GTCGCATCCA CATCAATAAA CACCGAAGCT GGCAGCGTCG ATATTCCAGG AACGACAATG
AAGGCGTTGA ACGATAGACC ATGGAAGGTT GAAGGCGACT TTAACAACGA TACGACAGTA
CTTTCAGAGA TGCGGCAAGC GCACCGATCA TGCAATGAAA CCACTATCGT CCTGACTACG
AATTTTATTC CGACTTCTCC CTCCCTGGCG ATCATCAACC GCACTATCCA TTCGATTAGA
AGGCTGAAAG GACTCTGTCC TACCGCACCC CTCATCATAT CTGTCGATGG TCTCAACAAG
GAAGCTCGAA GGATTCACAA CAACTCAGAA CCGCGACTGG AAGAGTACGT CAAAAGGCTC
CGAACCGTCT ACAACGAAAC GCATCAGAGA GTTGTGGCGA GCAATCATTC ATTGATGATT
ACCGGAACCG TCTATCAGGC CATGGATCTA GTCAAGACGG AGTTCGTTTA TGTCATACAG
CACGACATGC CATTTATTCA GGATATTGAC CATACTGCGC TTGTGCGGAC CTATGATCAA
TTTCCTGCGG TGCTTCGTTT GGTGCGATTC AATTTGAGAC CCAATATTCA ACGGGGAGAT
CTCGAAGGGA ATAATACATG CTATGCCGAA GAAACGCCCG TGAACGATGT AAATGGGATT
TCTCTCATCA AGACATGGAT CTGGAGTGAC AAGTAAGTAT GCAATGGAGT TTCGTGGAGA
GATGGATGAA CAAAAAGACA TACTAGTGAA GCTCTGGTAG CTACACTACG TTTGCTGTGT
CTTTCATACA TTCCTCAAAC TTTCCGCCCT TTTTATTCTT TAGCAACCAT TTCACACGAA
AGTCGTACTA CGACGAAATG AAAGAATTGT TCTACAAAAG ACACGGAAGG CTGCCTTTTG
CCATGGAATG GGTGATGCGA GTTGAGGGTC AAAAGAACTG CTCTTATTGG GGGACCTTCT
ATTACGGGCC TCAAGGGCAA GCCCCAACAA TTGCCCATAT GGATGGCCGT CAAACGACAC
AGGTAGCGGA GAACGAAGAT TTGCGTCTGC GTCGATGGAT GCGATAA
|
|---|
| Protein sequence | MQMKLQGYKK NYSNVILMIV LTHTIVNIIW RRPLNELRFP VASTSINTEA GSVDIPGTTM
KALNDRPWKV EGDFNNDTTV LSEMRQAHRS CNETTIVLTT NFIPTSPSLA IINRTIHSIR
RLKGLCPTAP LIISVDGLNK EARRIHNNSE PRLEEYVKRL RTVYNETHQR VVASNHSLMI
TGTVYQAMDL VKTEFVYVIQ HDMPFIQDID HTALVRTYDQ FPAVLRLVRF NLRPNIQRGD
LEGNNTCYAE ETPVNDVNGI SLIKTWIWSD NNHFTRKSYY DEMKELFYKR HGRLPFAMEW
VMRVEGQKNC SYWGTFYYGP QGQAPTIAHM DGRQTTQVAE NEDLRLRRWM R
|
|---|
| |