Gene PHATRDRAFT_29711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29711 
Symbol 
ID7194833 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp426763 
End bp427979 
Gene Length1217 bp 
Protein Length221 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183222 
Protein GI219125930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACCTACAAG AGTTGTTGCG AATAGTGGTT CCGTTCTATT GACGTCTCGT GTTCCTCCCT 
ACATTTTGTG TTTTATATTT GAGCATTCAA CTAACCAACT GCAACCATGG CGGCTACCGA
TCAAATTCGA CAGATGGTGA ACTTTATTCT CCAAGAGGCC CACGAAAAGG CCAACGAAAT
TCGCGTCAAG GTGGGTAAAG GATCGGTCCG CAAAGAGCTT ATACCTAGCT AGTTGTACGA
TCTCGCAACG GTGTTTTCAT TTCTGCCTAC GGTACGCCTC GGTATTCATG TCATCCTGGA
CGTTCTCGTG GAGATTTGCC GACGTTCCTT TCCGGACGGC GTAGTCGATG CAACTTTCTT
TGCCTCCTGT AGTTGACATT GTTTCTTCCC ATTTTACCTC GCATTGTTCA ATTTGTAGAT
GGCTTCGTCA ATACTCGCAC CGCATTCTGT ATCCATAGAA TTTACATGTA TCTCTTCCTC
ACACCAATTC CCTTTTTCGC CCGCACTTTC GTCTCCAGAC GGAACACGAT TTCAATTTGG
AGAAGCAAAC TTTGGTGCAC GAAGCCAAGT TGAACATTCA GGACGAATTC ACCAAGAAGG
AAAAGGATCG CGAAGTGCAG CAGCGTATCG CGCGATCGGC CGAGATTGGC GAATGCCGCG
TCAAAAAAAT GAAGATTCGC GACGATCTGT TGCAAAAGCT CGTGGCCGAT GCCGGCGCCA
AGTGTGCCGT CGTAGCGCGC GGTCAGAACT ACCCCCAGTT GCTCCAAAAA CTCATTGTCC
AGGGACTCAT CAAGATTGAA GAAATGGAAG TCACCGTTTT CTGCCGCAAC GAGGATATCG
GCACGATCGA AAAGATCCTC GACGTAGCCG TCCAAGAATA CGTGGAGATC ATGAAGCGGG
AATCCGGCGT CACGTTGGAG CCCAAGGTTG TCATGAACGA GAATCGTAAC AGGGATTTGA
CCACTAATTC GTACGGAGGT ATCGTGCTGA CCGCCCTTAA CGGTAAGATT GTTTGTGACA
ATACCATGGC GAGTCGACTG AATTTGGTGT ACGAAGAGCT TCTGCCCAGT ATCCGTGCAA
TTCTCTTCCC GGACGTGTGA GCGGTCGCTT AGTAGGCAGC GATTGGATGG AGCCTCGGCC
ATCGGTTTGA GAGCACGGCA TCATGCCAGT TGTAACGAGA GTAAACATCC GTATTAATCG
AGTGAACTGT TTGCGAA
 
Protein sequence
MAATDQIRQM VNFILQEAHE KANEIRVKTE HDFNLEKQTL VHEAKLNIQD EFTKKEKDRE 
VQQRIARSAE IGECRVKKMK IRDDLLQKLV ADAGAKCAVV ARGQNYPQLL QKLIVQGLIK
IEEMEVTVFC RNEDIGTIEK ILDVAVQEYV EIMKRESGVT LEPKVVMNEN RNRDLTTNSY
GGIVLTALNG KIVCDNTMAS RLNLVYEELL PSIRAILFPD V