Gene PHATRDRAFT_29666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29666 
Symbol 
ID7194790 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp216942 
End bp218501 
Gene Length1560 bp 
Protein Length408 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183180 
Protein GI219125841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGTCTCGCT GTTTTGCGGA TCGCGTAGTT TTCCCCGGAG CATCCGCTAG GATCTTCGCT 
GGGCATTTTG ATCCCTGCCG TCCTCACCAT AATAAATCTC CAAAAGAGCT CGTTGTTTGA
CACAATCTGC CTTTGGACGA GAATTTGAAA AGAGTGTACT AGCTAGAGCG ACACACTGGT
ACCTTCGTAC CAGTTCCAGC ACTTCCGCAA TGGAAGGCAT ACAAAATACC GGCAGCGATA
GCAGCAAGGC GAATGTGACA GTCGTCACGG AGCTTACTTC GAGCATTCCG GCAATCATCG
AAAAGGAAGA ATTTCCGGAT CGTGTTAGTG TCTTGCGCTT TGACGAATCC GTCCTGGCGC
CTGCATTCCG AGGTGACGAC GCAGTTTTCA AGGACTCTCA AGTTTCTCGG ATTGTGGATC
CAGCCGAGCA CATAGAATCG GAACGATCTG CTGGAACGCA AAGCAAGGGA ACTACTTCTC
GACCCACTTT CCAAGATTGG GCCAAGATTG TCCGGGTTTC TTCCCGATTT TCCGAGGTTA
ATCTCGAGCA GCTCGAACGT GTTCGTATGA TGCATGATCG TATTTCAGAG GGATCAGAAT
TTACTTTCAA CTACAACACT TTGTTGCTGG TGGCGTCCAT CTTGGCTGCA ATAGGTTTGG
CAGCCAACAG CTCGGCTACC ATTATTGCTT CCATGCTTGT GTCTCCAATC ATGGGCCCCG
TCGTAGGGAT GGCCTACGGT ACTCTAATTA TGGACTGGAA GCTGGTCAAA AAATCCGCCT
GGACCGAACT CGTGAGTCTC TTCGTCTGCG TCATCATGGG TGCCATTGTG GCGGCTTGCA
TCGGTCCCAC TGATTTGGCC GAGAACTGGC CGACGGCGGA AATGGACATA CGCGGACGCA
AACAGAATTT TTTCGTTGGT ATCCCCATTG CCTTTTTCTC CGGACTGGGC GTGGCCGTGT
CTTTGTTGGA CGATCAGACC AGCTCCTTGG TCGGGGTGGC TATTTCGGCA TCGCTGTTGC
CCCCCGCCGT TAACGCGGGC ATGATGTGGG TGGCGTACGG CTTTACTGAA GTCGACGTGT
TGGCTGGAGG CGGAGCCACG GTGACGGACT TCGTCGCGGG CTTGCTCAAT ATTACCGTTG
ACGAAAGCAG CGATATCCTA GCGGACTTTC GTGGCGACAG TGGACAGAAG GCTCCGGATA
CCAAGCGCGA CTTTAACGCC ATGGGAGGAG TCAGTATCGG TCTCACGTTG ATCAATATTC
TTTTGATTTG GTTCTCGAGT ATGCTCATGT TCCGCATGAA AGAGGTAAGT GGACGGTATT
GCCCATTGCT GAAGCGTTAT AGGTTCTCGA AACTCACGCG TCTCTGATTG TTCAGGTTCT
TCCAATCAAA AAGAATATCT TCTGGAGCGA TCTTGGCATT GCACGCAAAG TTTACCAGCG
CAAAGCCATC ATTACCGAGT CTACTGATAC TACAGTTCCG CAACCAGCGG TCGTTACCGA
CGTTTAAATT GTAAGCATCG CTTACGTCAA CGGGCTAAAG AAGTGCAGAT TGAGCCTTTC
 
Protein sequence
MEGIQNTGSD SSKANVTVVT ELTSSIPAII EKEEFPDRVS VLRFDESVLA PAFRGDDAVF 
KDSQVSRIVD PAEHIESERS AGTQSKGTTS RPTFQDWAKI VRVSSRFSEV NLEQLERVRM
MHDRISEGSE FTFNYNTLLL VASILAAIGL AANSSATIIA SMLVSPIMGP VVGMAYGTLI
MDWKLVKKSA WTELVSLFVC VIMGAIVAAC IGPTDLAENW PTAEMDIRGR KQNFFVGIPI
AFFSGLGVAV SLLDDQTSSL VGVAISASLL PPAVNAGMMW VAYGFTEVDV LAGGGATVTD
FVAGLLNITV DESSDILADF RGDSGQKAPD TKRDFNAMGG VSIGLTLINI LLIWFSSMLM
FRMKEVLPIK KNIFWSDLGI ARKVYQRKAI ITESTDTTVP QPAVVTDV