Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_29666 |
Symbol | |
ID | 7194790 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | - |
Start bp | 216942 |
End bp | 218501 |
Gene Length | 1560 bp |
Protein Length | 408 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183180 |
Protein GI | 219125841 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAGTCTCGCT GTTTTGCGGA TCGCGTAGTT TTCCCCGGAG CATCCGCTAG GATCTTCGCT GGGCATTTTG ATCCCTGCCG TCCTCACCAT AATAAATCTC CAAAAGAGCT CGTTGTTTGA CACAATCTGC CTTTGGACGA GAATTTGAAA AGAGTGTACT AGCTAGAGCG ACACACTGGT ACCTTCGTAC CAGTTCCAGC ACTTCCGCAA TGGAAGGCAT ACAAAATACC GGCAGCGATA GCAGCAAGGC GAATGTGACA GTCGTCACGG AGCTTACTTC GAGCATTCCG GCAATCATCG AAAAGGAAGA ATTTCCGGAT CGTGTTAGTG TCTTGCGCTT TGACGAATCC GTCCTGGCGC CTGCATTCCG AGGTGACGAC GCAGTTTTCA AGGACTCTCA AGTTTCTCGG ATTGTGGATC CAGCCGAGCA CATAGAATCG GAACGATCTG CTGGAACGCA AAGCAAGGGA ACTACTTCTC GACCCACTTT CCAAGATTGG GCCAAGATTG TCCGGGTTTC TTCCCGATTT TCCGAGGTTA ATCTCGAGCA GCTCGAACGT GTTCGTATGA TGCATGATCG TATTTCAGAG GGATCAGAAT TTACTTTCAA CTACAACACT TTGTTGCTGG TGGCGTCCAT CTTGGCTGCA ATAGGTTTGG CAGCCAACAG CTCGGCTACC ATTATTGCTT CCATGCTTGT GTCTCCAATC ATGGGCCCCG TCGTAGGGAT GGCCTACGGT ACTCTAATTA TGGACTGGAA GCTGGTCAAA AAATCCGCCT GGACCGAACT CGTGAGTCTC TTCGTCTGCG TCATCATGGG TGCCATTGTG GCGGCTTGCA TCGGTCCCAC TGATTTGGCC GAGAACTGGC CGACGGCGGA AATGGACATA CGCGGACGCA AACAGAATTT TTTCGTTGGT ATCCCCATTG CCTTTTTCTC CGGACTGGGC GTGGCCGTGT CTTTGTTGGA CGATCAGACC AGCTCCTTGG TCGGGGTGGC TATTTCGGCA TCGCTGTTGC CCCCCGCCGT TAACGCGGGC ATGATGTGGG TGGCGTACGG CTTTACTGAA GTCGACGTGT TGGCTGGAGG CGGAGCCACG GTGACGGACT TCGTCGCGGG CTTGCTCAAT ATTACCGTTG ACGAAAGCAG CGATATCCTA GCGGACTTTC GTGGCGACAG TGGACAGAAG GCTCCGGATA CCAAGCGCGA CTTTAACGCC ATGGGAGGAG TCAGTATCGG TCTCACGTTG ATCAATATTC TTTTGATTTG GTTCTCGAGT ATGCTCATGT TCCGCATGAA AGAGGTAAGT GGACGGTATT GCCCATTGCT GAAGCGTTAT AGGTTCTCGA AACTCACGCG TCTCTGATTG TTCAGGTTCT TCCAATCAAA AAGAATATCT TCTGGAGCGA TCTTGGCATT GCACGCAAAG TTTACCAGCG CAAAGCCATC ATTACCGAGT CTACTGATAC TACAGTTCCG CAACCAGCGG TCGTTACCGA CGTTTAAATT GTAAGCATCG CTTACGTCAA CGGGCTAAAG AAGTGCAGAT TGAGCCTTTC
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Protein sequence | MEGIQNTGSD SSKANVTVVT ELTSSIPAII EKEEFPDRVS VLRFDESVLA PAFRGDDAVF KDSQVSRIVD PAEHIESERS AGTQSKGTTS RPTFQDWAKI VRVSSRFSEV NLEQLERVRM MHDRISEGSE FTFNYNTLLL VASILAAIGL AANSSATIIA SMLVSPIMGP VVGMAYGTLI MDWKLVKKSA WTELVSLFVC VIMGAIVAAC IGPTDLAENW PTAEMDIRGR KQNFFVGIPI AFFSGLGVAV SLLDDQTSSL VGVAISASLL PPAVNAGMMW VAYGFTEVDV LAGGGATVTD FVAGLLNITV DESSDILADF RGDSGQKAPD TKRDFNAMGG VSIGLTLINI LLIWFSSMLM FRMKEVLPIK KNIFWSDLGI ARKVYQRKAI ITESTDTTVP QPAVVTDV
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