Gene PHATRDRAFT_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_2593 
Symbol 
ID7194808 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp301777 
End bp302766 
Gene Length990 bp 
Protein Length304 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183197 
Protein GI219125877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.319799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAGAAAATA ATCTCGTGGG GTCCATCCCA AACGAAATAT CCACTCTGCC CGAACTGGAT 
CGGTTGGAGC TTGCAGTGAA TGGTCTTGTG TCCTCCATTC CTTCGACGAT AGCCAACCTT
ACAAAACTCG TCGTGTTGGA TTTAGAGGCG AACAATTTGA CGGGAAATCC CTTTGGAAAC
GGACTTCTTG ACTTACCAAT ACTCAAACAA GTTTTCTTGT CGAGCAACAG CTTTACTGGC
AGCATCCCAT CTGATATCGG TTCCTTGACA CTTCTGGAAG AATTCTGGAT TGCGGGTAAT
GAGCTTATGG GGAGCATTCC GACAGGCATA GGCAGCCTGA CGGAACTCAA GAGTGTCTTT
CTGTATGACA ACCGTCTCGA CGGCACTCTC CCATCAGAAA TAGCATCTTT AACGGGTCTC
ACGAATTTCC AAATCCAAAA CAACGTCTTG GTGGGAATTC TGCCACAGAA TGGCTTCCCA
TCCTTAACCG CGCTAACCAC GTTGCGCTTG GACTTCAACT TTTTTTCCGG AACTACTCCC
TCCACTATTG GCGATCTCAT AGCGCTGACG GATCTGCGCG TCAACAACAA CTTTTTAACT
GGAGAGCTGC CCGCCTCGCT GGCAAGCTTA ACCAATCTAC GATTCCTTAC AGTGAATACC
AATTTTTTGG TTGGTTCTTT GTCGCCAACG ATGTTCACTG ATTTCACACA ACTAGATACA
GTTGACCTTT CGAGCTGCTT TTTTGAGGGT ACTTTGCCGG CATCACTATT TGACAGTGCA
ACCCTTCGAC TTGCTTATCT AAACAACAAT CAGTTCAGTG GTCGCATTCC CGAAAACTTT
TCTAAGTCGC CATTACTTCG AGATATCTTC CTGAACAACA ATCTTTTGAC TGGTCCTGTC
CCGGATATTG CGGTTGGTGA GTTGTTTACC TTGAACGAGT TCGTTCTGCA GGCCAATTTG
CTGACCGGGA GTATGCCGGC CAATGTTTGC
 
Protein sequence
EENNLVGSIP NEISTLPELD RLELAVNGLV SSIPSTIANL TKLVVLDLEA NNLTGNPFGN 
GLLDLPILKQ VFLSSNSFTG SIPSDIGSLT LLEEFWIAGN ELMGSIPTGI GSLTELKSVF
LYDNRLDGTL PSEIASLTGL TNFQIQNNVL VGILPQNGFP SLTALTTLRL DFNFFSGTTP
STIGDLIALT DLRVNNNFLT GELPASLASL TNLRFLTVNT NFLGTLPASL FDSATLRLAY
LNNNQFSGRI PENFSKSPLL RDIFLNNNLL TGPVPDIAVG ELFTLNEFVL QANLLTGSMP
ANVC