Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_2593 |
Symbol | |
ID | 7194808 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | - |
Start bp | 301777 |
End bp | 302766 |
Gene Length | 990 bp |
Protein Length | 304 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183197 |
Protein GI | 219125877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.319799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAAGAAAATA ATCTCGTGGG GTCCATCCCA AACGAAATAT CCACTCTGCC CGAACTGGAT CGGTTGGAGC TTGCAGTGAA TGGTCTTGTG TCCTCCATTC CTTCGACGAT AGCCAACCTT ACAAAACTCG TCGTGTTGGA TTTAGAGGCG AACAATTTGA CGGGAAATCC CTTTGGAAAC GGACTTCTTG ACTTACCAAT ACTCAAACAA GTTTTCTTGT CGAGCAACAG CTTTACTGGC AGCATCCCAT CTGATATCGG TTCCTTGACA CTTCTGGAAG AATTCTGGAT TGCGGGTAAT GAGCTTATGG GGAGCATTCC GACAGGCATA GGCAGCCTGA CGGAACTCAA GAGTGTCTTT CTGTATGACA ACCGTCTCGA CGGCACTCTC CCATCAGAAA TAGCATCTTT AACGGGTCTC ACGAATTTCC AAATCCAAAA CAACGTCTTG GTGGGAATTC TGCCACAGAA TGGCTTCCCA TCCTTAACCG CGCTAACCAC GTTGCGCTTG GACTTCAACT TTTTTTCCGG AACTACTCCC TCCACTATTG GCGATCTCAT AGCGCTGACG GATCTGCGCG TCAACAACAA CTTTTTAACT GGAGAGCTGC CCGCCTCGCT GGCAAGCTTA ACCAATCTAC GATTCCTTAC AGTGAATACC AATTTTTTGG TTGGTTCTTT GTCGCCAACG ATGTTCACTG ATTTCACACA ACTAGATACA GTTGACCTTT CGAGCTGCTT TTTTGAGGGT ACTTTGCCGG CATCACTATT TGACAGTGCA ACCCTTCGAC TTGCTTATCT AAACAACAAT CAGTTCAGTG GTCGCATTCC CGAAAACTTT TCTAAGTCGC CATTACTTCG AGATATCTTC CTGAACAACA ATCTTTTGAC TGGTCCTGTC CCGGATATTG CGGTTGGTGA GTTGTTTACC TTGAACGAGT TCGTTCTGCA GGCCAATTTG CTGACCGGGA GTATGCCGGC CAATGTTTGC
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Protein sequence | EENNLVGSIP NEISTLPELD RLELAVNGLV SSIPSTIANL TKLVVLDLEA NNLTGNPFGN GLLDLPILKQ VFLSSNSFTG SIPSDIGSLT LLEEFWIAGN ELMGSIPTGI GSLTELKSVF LYDNRLDGTL PSEIASLTGL TNFQIQNNVL VGILPQNGFP SLTALTTLRL DFNFFSGTTP STIGDLIALT DLRVNNNFLT GELPASLASL TNLRFLTVNT NFLGTLPASL FDSATLRLAY LNNNQFSGRI PENFSKSPLL RDIFLNNNLL TGPVPDIAVG ELFTLNEFVL QANLLTGSMP ANVC
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