| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_228 |
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| Symbol | |
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| ID | 7194815 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | - |
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| Start bp | 340302 |
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| End bp | 343634 |
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| Gene Length | 3333 bp |
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| Protein Length | 1028 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | probable serca-type calcium ATPase |
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| Protein accession | XP_002183209 |
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| Protein GI | 219125902 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAAGGTCTAT CGGAAAGTCA AGCATCGGCA AGGCTGGTGC AATTTGGTAA GAACTCGTTG
GAGCAATCCA AGTCGAAGTC TACTTGGCAG CTTATACTGG AACAATTCGA AGATCGACTT
GTACAAATTC TTCTGGTCGT CGCGCTCCTT TCGGGTGTCT TTTCCTACTT TGAAGTCCGT
CAGAGTGCCA CTGCAGCTGC CGAACTCGCC ACGGATGAGG CCTTGTGGAA GAGCTTTGTT
GAACCCCTTG TAATTTTGGC GATTTTGGTA GTAAACGCTG CTGTTGGTGT TTGGCAATCC
CAAAGTGCCA GTGACAGTCT CGATGCTTTA CAGCGTATGC AGTCGGCGAC GGCCACAGTG
CTACGAGATG GCGTTTGGAA ATCTTCCCTC GAAGCTTCCG ATCTCGTTCC CGGAGATATC
ATTGAGTTAC GAGTAGGGGA TAAAATCCCG GCTGATTCGC GACTTCTTTC GTTGCAATCA
TCATCGCTTC AAATCGATGA AGGCTCGCTT ACGGGAGAAT CTGTGACTGT TGGAAAATTG
CCTGGGGATG AAGGGCGTGC CGATTCACCC AACAGGCCAG TTCAGGACCA AAAGGGCATG
CTGTATTCTG GTACCATGGT TACATCCGGT TCTGGGAAGG CAGTTGTCGT TCAGACGGGC
ATGACGACGC AGTTTGGAAA AATCCAGCAA GGAGTTACAG CCGCCAAAGC CGAACAGCCG
AAGACGCCGT TGGCCATAAA ACTGGACGAA TTCGGAGAGA CTCTGACAAT CATTATTGGA
GTGATATGTC TGGCGGTATG GATTGTATCA ATTCCGAAAA TGAACGACCC CAGCTTTGGT
TCCGTCTGGG TCGGTGCTGT CTACTACGCA AAGGTGGCCG TCGCTTTGGG CGTGGCTGCC
ATTCCGGAGG GTTTACCAGC CGTAATCACC TTGTGTTTAA GTTTAGGAAC TCGGCGTATG
GCTGAGCGCA ACGTGATCGT CCGTAAATTG CAGTCGGTGG AGACACTGGG TTGCACATCG
GTAATTTGTA CCGACAAAAC GGGCACCCTG ACAACCAACG AGATGACGGT CGTCAGCCTG
GTTTTGTTGG AACACGATGA GGTAGGTGAG GTCAGTATTC GCGAACGTAT TGTGGAAGGG
TTTTCATACT CGCCGGTAGG TGAAGTCGAG GGCATACAAT ATAACAAAGA GGTCAAGGAG
GATCCCTTGG GTTCGGTAGC GGATGTTGCA GCGGTGTGTG CGCTCTGCAA TGATGCCAAG
ATCTTGGGCA TTGACTCTGA GGTACTTGAG TCTGAAGACG AAATTAATGA CCCCTCCGGT
AAGACCGCCA ACCGAAGTAT TGGCATGACA TTCAAAGGTA CGAAGGATGT AAAGACGGGA
AAAGAAAAGA AAGTCAAAAA TACGGAGAAA GCCTTTCAAC GTGTCGGCGA GCCAACTGAA
GCGGCTCTTT GTATTCTTGC CGAAAAGCTC GGAGGAATGT CTCACTACCT GGAAAAGGGC
CGCTTAGATA AAAAAGGATT GCATTTCGAT GTCCCGCCTA GTGTATTGGC CAGTGCCAAC
GTTGAGTCAT GGCGCGAGGC TCATCCGCGC CTAGCTACTT TGGAGTTTAG TCGAGACCGG
AAATCTATGT CTGTTTTGTG TGGATTTTCT AAAGGAGATT ATCCTGGGGC GGCAGCCTAT
CGCTCTGGCG TCAAATCAAG GAAGGCCGGC AATCGTCTTC TAATCAAGGG TGCTCCCAAT
TTACTCATTG AACGCTGCAC GAATGTAAAG TTCCGTGACG GAACCATTGC TCCCATGACG
GGCGCTCTCC GACGATCCAT CGAAGATCAG GTATCAAAAA TGGCTGCTCG ACCTCTTCGT
TGTCTCGCTT TGGCAATTAA GGATCAAGAC GAACTGGACG ACAGCTTGAA ATCTTTTGAG
CCAGACAATG ACCGTGCCGT TTCCCGGCAT CCTCTCTTGT CGGATCCAAC CAATTACAGA
AGTGTCGAAT CCGGGTTAAC GTTAGTTGGT ATCGTTGGCA TAAAGGACCC CGCGCGTCCA
GAAGTTGCGG AAAGTATGAA GCAATGCACA CGCGCGGGGA TCCGTGTAAT GATGATTACG
GGCGATGCAA AAGATACCGC TATTGCGATT GCCAGGGATG TGAACATCTT CTCCCCAGTA
GACGATGGAC GACCACTCAA AGCGTATGAA GGCCGCGAGT TCTTCCTCAA GGCGGAACGT
GAGCAACTGG AGATTCTTAG AGAAGGTAAC ATTGTTTTCT GCCGAGCCGA GCCAGCAGAC
AAGCAGAAGT TGGTGAAAAT GCTACAAAAT TTAGACGAGA TTCCTGCAAT GACTGGGGAT
GGAGTGAATG ACGCTCCTGC CTTACAGCAA GCTGCTATTG GAATTGCAAT GGGAATCACC
GGGACGGAAG TTTCGAAAAA TGCTGCTGAC ATGATACTTG CCGATGACAA TTTTTCAACG
ATTGTCAGTG CTGTCGAAGA AGGGCGACGT ATATACTCCA ACATGCAAGC GTTCATTTGT
TTCTTGATTA GTTGTAATAT TGGGGAGATT TGCGCAATTT TTTTTGCTAC TCTTGCTGGC
TTCCCAGAAC CTTTGACTGC GATGCATTTA TTGTGGGTCA ACCTCGTAAC GGATGGACCA
CCTGCAACTG CACTCGGCTT CAATCCACCG GCACCTGATC TCATGGAGCA GCCGCCGCGG
CCCAGCGACG AGCCAATTAT GACTCGATGG TTATTGACGC GCTATTGTAT TACAGGGTTA
TACGTTGGAC TCGCAACGAT TGGAATTTTT GCCCAACACT ATCTGTCGCA GGGCATAACG
TTGGCTCAAT TGGCAACATG GAGTCAATGT GGCGAGTTTT GGACACCGCC TACAGAATCA
GCTTCTTGCA CAGATCTATT CCAGGGCTCA GCTCGTATGC TACCTCAAAC TCTAGCGTTG
ACTACTTTAG TTTGTATGGA AATGTTAAAG GCCTTATCGG CAGTTTCCAT GGATGATTCG
ATTTTCCGAG TCGGACCTCA AGAAAACAAG TGGTTAATAC TCGGAGTGTC CGGCCCTTTT
TTGCTACATC TTATGGTTCT TTACAGCTCA GACCTCGGTA TTCCAGCTCT CGGAGAAAGC
TTCGGCATGG TATGTTTATT TGTTCTGCTG TGATAGTTTT CGTCTTGTAT TAATTCATCC
AACTTATTTC CTTAACTCCA ATGTTGACTT ATACAGGTAC CTCTTTCGAT CGATGACTGG
GCCCTGGTTA TCTCCTGGGC TGCACCCATT CTCTTAGTCG ATGAAATCTT GAAAGCTATA
GGACGATGGG TTAATCGAGA AGACCGGAAG AAG
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| Protein sequence | EGLSESQASA RLVQFGKNSL EQSKSKSTWQ LILEQFEDRL VQILLVVALL SGVFSYFEVR
QSATAAAELA TDEALWKSFV EPLVILAILV VNAAVGVWQS QSASDSLDAL QRMQSATATV
LRDGVWKSSL EASDLVPGDI IELRVGDKIP ADSRLLSLQS SSLQIDEGSL TGESVTVGKL
PGDEGRADSP NRPVQDQKGM LYSGTMVTSG SGKAVVVQTG MTTQFGKIQQ GVTAAKAEQP
KTPLAIKLDE FGETLTIIIG VICLAVWIVS IPKMNDPSFG SVWVGAVYYA KVAVALGVAA
IPEGLPAVIT LCLSLGTRRM AERNVIVRKL QSVETLGCTS VICTDKTGTL TTNEMTVVSL
VLLEHDEVGE VSIRERIVEG FSYSPVGEVE GIQYNKEVKE DPLGSVADVA AVCALCNDAK
ILGIDSEKAF QRVGEPTEAA LCILAEKLGG MSHYLEKGRL DKKGLHFDVP PSVLASANVE
SWREAHPRLA TLEFSRDRKS MSVLSYRSGV KSRKAGNRLL IKGAPNLLIE RCTNVKFRDG
TIAPMTGALR RSIEDQVSKM AARPLRCLAL AIKDQDELDD SLKSFEPDND RAVSRHPLLS
DPTNYRSVES GLTLVGIVGI KDPARPEVAE SMKQCTRAGI RVMMITGDAK DTAIAIARDV
NIFSPVDDGR PLKAYEGREF FLKAEREQLE ILREGNIVFC RAEPADKQKL VKMLQNLDEI
PAMTGDGVND APALQQAAIG IAMGITGTEV SKNAADMILA DDNFSTIVSA VEEGRRIYSN
MQAFICFLIS CNIGEICAIF FATLAGFPEP LTAMHLLWVN LVTDGPPATA LGFNPPAPDL
MEQPPRPSDE PIMTRWLLTR YCITGLYVGL ATIGIFAQHY LSQGITLAQL ATWSQCGEFW
TPPTESASCT DLFQGSARML PQTLALTTLV CMEMLKALSA VSMDDSIFRV GPQENKWLIL
GVSGPFLLHL MVLYSSDLGI PALGESFGMV PLSIDDWALV ISWAAPILLV DEILKAIGRW
VNREDRKK
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