Gene PHATRDRAFT_22609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22609 
Symbol 
ID7194895 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp477868 
End bp479200 
Gene Length1333 bp 
Protein Length181 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183105 
Protein GI219125685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.552816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACAGCTTCT ACTACTACTC TGGAATCTTT CCTCACTTGC ACGTCCACTG GTGATTCGCG 
CAGTTTCTTC CGTCTCTTTT GAGCTTACCA ACCATGACCG AAGTAGTAGC CGGATTCGAA
GGATGTCCGT CCTGGGCTCC CGCCTTGTAA GTCCACTTCG TCTCGTGCAA CAGTAGGCTT
TTTCCGGAGG TCACCCCACG CTGCGGCGCC AGGGAGGATT CTCTCCTACA GTGAGCGTGC
GGGCGGGTGG TGGACAATGA CGACTGCACT CTCGGAAGCA ACACAAACAA ATACGGACAC
GGAACACGCC ATGAAAACCT CTTTCTTTTT CTCTTTTTCA CAACGCTGTG CTGCTGTTGT
CTCGTGTCTT TTATCTCTTT CGTTTCTGCT CCACTTACAC ACTTTGTCGT TGCGCCAGTG
GATACTTGGG TGCGTCTAGT TGTATGATTC TGGCTTCCTG GGGCAGTGCC TGGGGCACCT
GGCGGGCGGG TCTCGGTGTG TGTCACATGG GAATTGACCA TCCCGCTGGG ATTATCAAAA
ATATTGTCCC CATTGTCATG GCTGGTGTGC TCGGTATTTA CGGACTCATC GTATCCGTCA
TTATCATTCA AGCCGTCACA CCACCCAACA GTGACCACAC TAACGTATAC AGCTCCTTCA
ACGGATACAC ACACGTACGT ACTGTACCGG AAACGGGCAA TGTGTCAACG ACAAGGAATG
GGCCCATTCC TTCTCTGTTT CGAAATTTCT GACCCGTATT TTCTCTCTTG GCTGCCTGGC
TTGGGTATAT GCACATACAT ATACGCACAC ATATACAGTT TGCCGCTGGT CTTTGTTGTG
GTCTTTCGTG TTTGGCGGCG GGTGGAACGA TTGGTATTCT CGGCGACGCC GGGGTACGAG
CCTTTGGCGT CAAGGCCAGC AACGGCCGCA AGTGGTACTG GGACGGCTCT GGTGACGACA
ACGGCATGGA CGACGGCCTC GGTACTTCCC GGGGCAACAA CAGCGTGGAA GGTGCCAACA
AACTGTACGT CGGCATGCTT ATTATGCTCA TCTTCAGTGA AGCGCTAGCC CTGTACGGAT
TGATTGTGGC GTTAATTCTA TCCCAACACA GCTACTCGTG TGAATAAAAG TTCGCGTGAG
GCAGATCCGG AGAGAAGACG AGTTTCGGTT AGTCGAGGAC ATTATGTGTG GAAGGTGTTG
CGCGGGTTTG GGACTCGTAC ACATCCCGTC GATTGTACAC GGCTGCGGAT TATTCTCTGG
AAATGGAGTC ACTCCTTGGT GTTTGTTATG CTTCGTTTGT CTTTTTAAGT GTAACCCAAT
ATTGCTTACC GTT
 
Protein sequence
MTEVVAGFEG CPSWAPAFGY LGASSCMILA SWGSAWGTWR AGLGVCHMGI DHPAGIIKNI 
VPIVMAGVLG IYGLIVSVII IQAVTPPNSD HTNVYSSFNG YTHFAAGLCC GLSCLAAGGT
IGILGDAGVR AFGVKASNGR NVEGANKLYV GMLIMLIFSE ALALYGLIVA LILSQHSYSC
E