Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22609 |
Symbol | |
ID | 7194895 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 477868 |
End bp | 479200 |
Gene Length | 1333 bp |
Protein Length | 181 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183105 |
Protein GI | 219125685 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.552816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACAGCTTCT ACTACTACTC TGGAATCTTT CCTCACTTGC ACGTCCACTG GTGATTCGCG CAGTTTCTTC CGTCTCTTTT GAGCTTACCA ACCATGACCG AAGTAGTAGC CGGATTCGAA GGATGTCCGT CCTGGGCTCC CGCCTTGTAA GTCCACTTCG TCTCGTGCAA CAGTAGGCTT TTTCCGGAGG TCACCCCACG CTGCGGCGCC AGGGAGGATT CTCTCCTACA GTGAGCGTGC GGGCGGGTGG TGGACAATGA CGACTGCACT CTCGGAAGCA ACACAAACAA ATACGGACAC GGAACACGCC ATGAAAACCT CTTTCTTTTT CTCTTTTTCA CAACGCTGTG CTGCTGTTGT CTCGTGTCTT TTATCTCTTT CGTTTCTGCT CCACTTACAC ACTTTGTCGT TGCGCCAGTG GATACTTGGG TGCGTCTAGT TGTATGATTC TGGCTTCCTG GGGCAGTGCC TGGGGCACCT GGCGGGCGGG TCTCGGTGTG TGTCACATGG GAATTGACCA TCCCGCTGGG ATTATCAAAA ATATTGTCCC CATTGTCATG GCTGGTGTGC TCGGTATTTA CGGACTCATC GTATCCGTCA TTATCATTCA AGCCGTCACA CCACCCAACA GTGACCACAC TAACGTATAC AGCTCCTTCA ACGGATACAC ACACGTACGT ACTGTACCGG AAACGGGCAA TGTGTCAACG ACAAGGAATG GGCCCATTCC TTCTCTGTTT CGAAATTTCT GACCCGTATT TTCTCTCTTG GCTGCCTGGC TTGGGTATAT GCACATACAT ATACGCACAC ATATACAGTT TGCCGCTGGT CTTTGTTGTG GTCTTTCGTG TTTGGCGGCG GGTGGAACGA TTGGTATTCT CGGCGACGCC GGGGTACGAG CCTTTGGCGT CAAGGCCAGC AACGGCCGCA AGTGGTACTG GGACGGCTCT GGTGACGACA ACGGCATGGA CGACGGCCTC GGTACTTCCC GGGGCAACAA CAGCGTGGAA GGTGCCAACA AACTGTACGT CGGCATGCTT ATTATGCTCA TCTTCAGTGA AGCGCTAGCC CTGTACGGAT TGATTGTGGC GTTAATTCTA TCCCAACACA GCTACTCGTG TGAATAAAAG TTCGCGTGAG GCAGATCCGG AGAGAAGACG AGTTTCGGTT AGTCGAGGAC ATTATGTGTG GAAGGTGTTG CGCGGGTTTG GGACTCGTAC ACATCCCGTC GATTGTACAC GGCTGCGGAT TATTCTCTGG AAATGGAGTC ACTCCTTGGT GTTTGTTATG CTTCGTTTGT CTTTTTAAGT GTAACCCAAT ATTGCTTACC GTT
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Protein sequence | MTEVVAGFEG CPSWAPAFGY LGASSCMILA SWGSAWGTWR AGLGVCHMGI DHPAGIIKNI VPIVMAGVLG IYGLIVSVII IQAVTPPNSD HTNVYSSFNG YTHFAAGLCC GLSCLAAGGT IGILGDAGVR AFGVKASNGR NVEGANKLYV GMLIMLIFSE ALALYGLIVA LILSQHSYSC E
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