Gene PHATRDRAFT_22554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22554 
Symbol 
ID7194745 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp299673 
End bp301001 
Gene Length1329 bp 
Protein Length419 aa 
Translation table 
GC content56% 
IMG OID 
Productmannosyltransferase 
Protein accessionXP_002183068 
Protein GI219125608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAGTAACACC TTGCCGTAAC ATCCAAAATG ACCACTGACA CTGCCGCTTT GTCGGACACG 
ACGAACAAGC CGCTACAGGT CGTGTTTCTG CATTTGGATT TGGGGATTGG GGGCGCGGAG
CAGCTTGTCC TGCAGTTGGC GCACGCGTCG GCCTCTCCAC ACGTGGGACA CGAGGTGCAT
CTCGTTACGA CCCGGTGCGA TCCCACCCAC TGCTTTGCAT CGGTCCAACC GGGAGGCGAC
CTGCACGATG CCCTGCACGT GAAAGGACAA TGGATTCCCG CGGACCTGTG CGGCTACGCT
CGCGCCTTTT GCAGTACCCT CCGTGTTCTC TATCTGAGTT TCTGGATTGC CCGTCGTTGG
CCCGACGTGG ACCTCATTGT GGTTGACGTG CTGCCCACGC CGCTCCCTTT TTTGCGATAT
CTTAGTCACG CCGCGTTGTT GTTTTACTGC CACTTTCCCG ATCAACTGCT CGTTCGACAA
CCGTCGGCGT CGGGGCGTGT ATCGCAGAAT CATCGCGCAC TCGCGCTGGC CAAACACTAC
TACCGACAAC TCCTGAATGC AGTGGAAGAG CTGTCTATGC GTCACGCCGA CCTGTGTGTG
GTAAACAGTT GCTTTACCCA ACAAACGGTC CGAAACACCT TTCCCTCCTC CTTTCCCGAG
CCCAATCCAT TGCCGGTTCT CTATCCCGCC CTGGATGTTG CCTCTCTCGA TCGACAACAA
CAGCAACAAG AAAAACTCGA GGGAGCGCCC AGCATTGTCG ATTTAATATC TTCCTCCTCA
AACAAGAAGA AAAATCTGAT AGTTTCGCTC AATCGCTACG AACGTAAAAA GAATTTGGAT
TTGTTGATAC GTGCCGCAGC TTGGCTGCGA CAACACAACC AACCGATGCC CGAAGCCGTC
GCGAACCAGA CGGAGCAGAC CCACTTTGAA ATCGTCATTG CCGGTGGCTA CGACGTGCGC
AACGTAGAAA ATGTGGAATA CCGTGCCGAA CTGGAACAAC TCGCCAACCA GCTCAACGTC
CCCGTTACCT TTCTGCAATC CATCGACGAT GGGACCCGTG CGTCGCTCCT CGCTCATGCT
TTGTGCGTGG TATACACGCC GACGGGGGAA CATTTTGGCA TTGTACCGCT CGAGGCCATG
TATGTGGGTA CACCCGTGGT GGCTGTTGAT GACGGAGGAC CGAAGGAAAC GATTCGACAC
GGAGTCACGG GATTCCTGTG TCAGCCCACA CCGGCTGACT TTGGTCAAGC CCTACAAACG
CTGCTGAACG ATCCGGAACA TGCGGAGCGC ATGGGACGGG CCGGGCGGGA ACACGTTCGG
GATACCTTT
 
Protein sequence
MTTDTAALSD TTNKPLQVVF LHLDLGIGGA EQLVLQLAHA SASPHVGHEV HLVTTRCDPT 
HCFASVQPGG DLHDALHVKG QWIPADLCGY ARAFCSTLRV LYLSFWIARR WPDVDLIVVD
VLPTPLPFLR YLSHAALLFY CHFPDQLLVR QPSASGRVSQ NHRALALAKH YYRQLLNAVE
ELSMRHADLC VVNSCFTQQT VRNTFPSSFP EPNPLPVLYP ALDGAPSIVD LISSSSNKKK
NLIVSLNRYE RKKNLDLLIR AAAWLRQHNQ PMPEAVANQT EQTHFEIVIA GGYDVRNVEN
VEYRAELEQL ANQLNVPVTF LQSIDDGTRA SLLAHALCVV YTPTGEHFGI VPLEAMYVGT
PVVAVDDGGP KETIRHGVTG FLCQPTPADF GQALQTLLND PEHAERMGRA GREHVRDTF