Gene PHATRDRAFT_22525 details

Gene Information

• Locus tag: PHATRDRAFT_22525
• Symbol: UBC2
• ID: 7194708
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: -
• Start bp: 128406
• End bp: 129256
• Gene Length: 851 bp
• Protein Length: 147 aa
• GC content: 52%
• Product: ubiquitin conjugating enzyme E2
• Protein accession: XP_002183160
• Protein GI: 219125799

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.589425
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTGA AGCGAATTAA CAAGGTACGT ACGCAAGCAA AAGTGTGTGC CTGAAAACAA 
AACCGTGACG GAACCAGAAA GGAAACCAAA GTCGACGAGG TTCCGCCACG ATCGGACTCC 
AAGCCTACGC TACCCATGGG AATGATGGGC ATCGCTTCGA AACGGGAGGA TGTTCGGAGT 
GTGGAGCATC AGCTTTGGCA CACCGTTGAT TAGTTGGTTA TGTTGATGAC CGAACGACAA 
TGGCCGATGC CCTTGGCGTG ACCAGCCGGT GCTGTCGATT GCGCACGAAC TCTTTTTCAC 
ATTTTGTACG ATTCATTTCT TTAGGAACTT GTCGATCTCG GCAAAGACCC TCCGTCAAAT 
TGCTCGGCTG GTCCCGTTGG TGACGATATG TTCCATTGGC AGGCGACCAT TATGGGCCCG 
GAAGACTCTC CGTATTCTGG CGGAGTCTTC TTTCTCGACA TTCACTTCCC CGCCGATTAT 
CCGTTCAAGC CCCCCAAGGT CCACTTCACC ACACGTATTT ACCACTGCAA CATCAACTCC 
AACGGCGGTA TATGTCTCGA TATCCTCAAG GACCAGTGGA GCCCGGCATT AACCGTGTCC 
AAAGTTTTGC TTTCCATCTG TTCCCTCTTG ACGGACGCCA ATCCGGATGA TCCACTGGTG 
CCGGACATAG CGCAGCTGCT CAAAACGGAC AGGGCTCGAC ACGATAGTAC GGCGCGGGAG 
TGGACTTCGA AGTATGCTAT GTAGCACACG CCGAAGCAAA AAAGCAACCA CGGGCGCGCG 
GTGCCGTAGT CGTCGGTCGC ACTCTTTCTG CAAGCACATT CTAAAATTTG AGAAACCTAT 
TTGAAAACTG G 

 

Protein sequence

MSLKRINKEL VDLGKDPPSN CSAGPVGDDM FHWQATIMGP EDSPYSGGVF FLDIHFPADY 
PFKPPKVHFT TRIYHCNINS NGGICLDILK DQWSPALTVS KVLLSICSLL TDANPDDPLV 
PDIAQLLKTD RARHDSTARE WTSKYAM