| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_22510 |
|---|
| Symbol | |
|---|
| ID | 7194699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011686 |
|---|
| Strand | + |
|---|
| Start bp | 66802 |
|---|
| End bp | 68163 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183026 |
|---|
| Protein GI | 219125521 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.162315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACGA CTACCCCGAG CCAGTCCAAG ACACTCGACC CATTGCTATT GTGGATGATT
CACGGAAACT ACTATGACCT CCACACGTAT GTATCGCGGC ATCCCGGTGG AAAGGAAGCT
ATTCTGTTGG GACGCGGTCG CGACTGCACC GCCTTGTTCG AATCCTACCA TCCCTTCACT
TCGCAGCACC GTCGTGTATT GGAAAAACAT CGAGTGACAA TTGACACCTC GTTTTGCAGC
AAACAGCAAG ACAGAAAAGT ATCGAAACAA ACAGTTTCAT CCAGCGAACA AGCCAGTGAC
GTCTTTTACA ACATGTTGTG TCAGCGCGTC GCGCACGCAC TGCAATCTCA AGGAGTGGAT
CCGATCCGTG ATCGAGGTGC CACATGGACA CGCAGTATCT ACTACGTCTT TCTGTTCGCC
GCATTGCTAG CTAGCGGATA CGCTCACTGC ACGGGAAGCC TACTCGGTAG CCTTCTCTTT
GGTGTGGCTG GTTGGTTTAT TGGTGCTTTG GGACACGATG GCGGCCACTT TGCTGTCTCT
CGCCGAGCCT GGCTCAACGA TTTTTCCGTC TGGGGTATTT CCTGGTTGTG CAATCCTATC
ATGTGGCAAC ACCAGCACAC GTACGCGCAC CATAGTTTCA CCAACGAATT TGATCACGAT
CCGGATTTGC ACCACTTCAC AACCTTTCTC CGAGTACATC GCAAGTTTCA GCAAAACTGT
ATTTATCGCA ACCAAGCCAA CTGGGTGTAC GTGTTTTGGG CCTATACCTT TGTTACCTTT
GGCGCATGCT TTTGGATTCC ATGGGGCGTG TTGCGGGAGC AGACCTTGTA CGGACTCGTC
GATTGGACGG ATCGGAAGCG TCCGTCACGG ACGGCGGCCT TTGTGTTCCA CTTGGTAACC
TACTTTGGTC TCGTCATGGT GCTCCCCTTT TGGACGCACG GAACTTGGTA CAAGGCGTGT
TTGGGTGTCA TCTTGCACAT GACCACCTCG GGCTTGATCT TTGCCTTTTT CTCGCAAATC
AATCACATCA ACGAACTATC GTTGGACGAA AAGGTCGTGA AACTGCACCG ATCCACGTTG
GATCCTACCG TGCGCGATTC GTGGGCCGTA GCGCAGGTGG AAGCCTCCAA CAATTTTTGC
ACCGACTCGG CATTTTGGCA TCTGTTCTCC AACGGACTTA ATTTGCAAAT TGAACACCAT
CTGTTTCCGG GAATCAACCA TTGCCACTTG CATCACATCG CGCCGGTCGT CCGCGAAACC
TGCAATGAGT ACGGTGTGCG GTACAAGTCG TACGATAGTT GGTCCGATAT AATGCGAGCA
ATGTTGAAGT GGCTCGACCA ATTGTCGGTT GGTCTGGACT GA
|
|---|
| Protein sequence | MATTTPSQSK TLDPLLLWMI HGNYYDLHTY VSRHPGGKEA ILLGRGRDCT ALFESYHPFT
SQHRRVLEKH RVTIDTSFCS KQQDRKVSKQ TVSSSEQASD VFYNMLCQRV AHALQSQGVD
PIRDRGATWT RSIYYVFLFA ALLASGYAHC TGSLLGSLLF GVAGWFIGAL GHDGGHFAVS
RRAWLNDFSV WGISWLCNPI MWQHQHTYAH HSFTNEFDHD PDLHHFTTFL RVHRKFQQNC
IYRNQANWVY VFWAYTFVTF GACFWIPWGV LREQTLYGLV DWTDRKRPSR TAAFVFHLVT
YFGLVMVLPF WTHGTWYKAC LGVILHMTTS GLIFAFFSQI NHINELSLDE KVVKLHRSTL
DPTVRDSWAV AQVEASNNFC TDSAFWHLFS NGLNLQIEHH LFPGINHCHL HHIAPVVRET
CNEYGVRYKS YDSWSDIMRA MLKWLDQLSV GLD
|
|---|
| |