| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54883 |
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| Symbol | |
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| ID | 7203722 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011685 |
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| Strand | - |
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| Start bp | 11991 |
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| End bp | 15092 |
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| Gene Length | 3102 bp |
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| Protein Length | 980 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182883 |
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| Protein GI | 219125219 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0342548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAACTGTGAT CTCCATCGTC GTTTTGTGTT CTTCAATAGA ACTACGAAGC AACCCCACCG
TCTTTACGCT CCTAACCCCG CCCTACCGCC CATCCGCAAC CTCTTCGGTC CCGATGTCGA
CCTCGGCTCA TTTCAAACTG AGCGACTTTC CTCACAAAGT CCTCGACCCG ATCGCCACCC
TCACCGTCCC ACCGACCTAC GCGACCATCA AGCGTGCCCA ACGCCAGCTC ATGACTAACG
CCGCCGCCAT TCCCACACTC AACGGTGGTG GCGCCCATGG CCATATGGCC CTGACCTTGA
CCGCCCTTGC CTACGCCGAC ATCAGCAACG TCCCGTTCGT CATTCCCGTC GCCCCTCCGG
CCAATCCGCC TCCTGGTGCC ACGCAACCGC AAATCACCGA AAACAACCGC ATTCATCAAC
ACGATGCCGA CATCTACAAC CTTTATGTCG CCGTCAACAA CGCGCTTCGC CAGCAACTTC
TCGACGCGGT TCCCCGCATT TATGTCCGCG CCCTCGCCCA TCCCATGTTC GAGTTTAGCA
ACGTCACGTG CCTCGACTTG CTCTCGCACC TCTGGACCAA ATACGGTACC ATCAAGCCCG
CCGAGCTCCA GAAAAATTTC CAGTCCATGT ACACCCCTTG GAACACGACC GAGCCGCTTG
AATCAGTTTT TCTTCAGCTC GACGAGGCCA TCGCTTTCTC TGTTGACGGT AACGACCCCA
TCTCGGAAGC TGCTGCTGTT CGCGCAGGCT ACGAAGTCAT TGCGCACTCG GGCCTGCTCC
CCCTGGACTG CAAAGAATGG CGCAAATTGC CTACTGCTGC TCACACCCTT GCCCATTTCC
AGCAGCACTT TTCCCTGGCC GACGAAGACC GGCGCCTCAC GGCAACCACC GGTTCCCTCG
GATACGCCAA CGTGCTTGCT GCTGCCCCCT CTCTCGCTCT TGCCACGACC TCCGACACTC
TTAGCCTTCC TTTCTCCGCG CTCTCTGTGT CCCAGACTTC TGTCTCTTCG CCGGACATGA
CCTACTGCTG GACCCATGGT ACCAGCAAAA ACCGACGCCA TACAAGCGCC ACGTGCAAGA
ACAAGGCCCC TGGCCACCGC GACGACGCGA CCGCCACCAA CACTCTCGGC GGCTCCACCA
AGGTTTGGAC GGCTCCCAAG CCCCCTGAAT AGGAAAGAGG GACGGCTACG CCGATGGTTA
ACTCTAGTAA TACCGATTAT TTAAATCATA TTACTAGTCT TAATTCATCT GTAGTCCCCT
CCCCGCCTAG TCCCCATACC TCGGCCATTG CCGACACCGG TTGCACCGGC CATTACATCA
CCATCAACTG CCCCCACACC GACAAACGTC CTGCGAATCC CAGCCTTGCC GTCCGTGTCC
CTAACGGCGC CGTCCTCCGC TCAAGCCACA TTGCCACCCT GGCCCTCCCT GGCTTCTCCC
CTTCCGCTTG CCAGGCCCAC ATCTTCCCCG GGCTTGCCTC GCACCCACTC ATTTCGATTG
GGCAACTTTC CGACGACGGC TGCACTGCCA CTTTCTCAGC CACTAGCCTT GAGATCCACC
GCGACACCAC ACTACTCCTC TCCGGCACTC GTGCACCCAC AACCGGCCTC TGGCACCTCG
ATCTTACCCC CGCCAAGCCT CCCAACACGG CCCATGCGCT TGTTCCGCAC ACACCCCTTG
CCGACCGCAT CGCTTTTGTC CATGCCTCGC TCTTCTCCCC GGCTCTCTCC ACATGGTGCC
AGGCCCTCGA CTCCGGCCAC CTTGCAACTT TCCCCGACCT TTCCTCCCGC CAAATCCGCA
AGTATCCACC TAGTTCCCCT GCCATGGTCA AAGGTCACCT TGACCAACAA CGCGCCAACC
TTCGCTCCAC CAAGCTTCCC CCTGTCTGTC CCCCCACCAC GACGGAACCC CCAGCCGCCG
CTGTGCCCGA CTTTGATCCT CCCGACGCCC ACCCTATCGC ACGCACACAC CATGTCTTTG
TTGCCCACCA ACGGGTCACC GGTCAAATCT ACACGGACCA ACCGGGCCGT TTCCTCACTC
CCTCAAGTGC CGGACACAAC GACATGCTTG TGCTCTACGA TTTTGATAGC AATGCCATCC
ATGTCGAGGT CATGAAGAAC AAGTCCGGCC CCGAGATTCT TGCCGCCTAC AAACGCGCAC
ACTCTCTCTT TACCCAACGC GGCCTCCGTC CCCAGCTCCA ACGCCTCGAC AACGAAGCCT
CTACAGCCCT CCAATCCTTC ATGACCTCGG AACACGTCGA CTTTCAGCTG GCACCTCCCC
ATCTGCACCG TCGTAATGCC GCCGAACGGG CCATACGTAC CTTCAAAAAC CACTTTATTG
CTGGCCTCTG TACCACTAAC CCGGATTTTC CCCTCCATCT TTGGGACCAC CTCCTCCCAC
AGGCCCTTAT CACCCTAAAT CTTCTTCGTC GCTCCCGCAT CAATCCCAAG CTGTCCGCCC
ACGCCCAGCT TCATGGTGCT TTCGATTACA ACCGCACCCC GCTTACTCCT CCCGGGACTC
GCGTCCTAGT CCACGTCAAG CCGTCCGTCC GCGAAACTTG GGCCCCCCAT GCTGTCGAAG
GTTGGTACCT CGGCCCCGCC CTGAACCATT ACCGTTGCCA CCGCGTCTGG ATCACGGAAA
CACGTGCCGA ACGTGTTGCT GACACCCTTT CCTGGTTCCC GACCCGCATT CCCATGCCTG
CCGCTTCGTC CACCGACCGC GCCCTGGCCG CCGCCCGTGA CCTAGTCCAT GCCCTCCAGA
ATCCTTCCCC TGCGTCTCCG TTCGCCCCCC TCGATGCCAC CCAGCACAAG GCACTCACCG
ACCTTGCCAA TCTCTTTGCC ACCGTGGCCG CCCCGGCCGC CGACGTCCCT GCACCTGAAC
CTGTGCCTCC GGTCCGTCCT CCTACCCCAG CACCTCCCCC TGCTCAGGTC CGTTTTGCCG
TTCCTCTTGT CACGGCCGAA CATGCCCCTG CACTTCCGAG GGTGCCCATT CCGGCCACAG
CACTTCCGAG GGTGCCCACC ACGGCCACCT ATCACTCTCG CACCCGCAAC CCCGGCCGCC
GCCGCCGCAC AGCACGCAAC CAACCGGTAA CCCCAACCCT AG
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| Protein sequence | MSTSAHFKLS DFPHKVLDPI ATLTVPPTYA TIKRAQRQLM TNAAAIPTLN GGGAHGHMAL
TLTALAYADI SNVPFVIPVA PPANPPPGAT QPQITENNRI HQHDADIYNL YVAVNNALRQ
QLLDAVPRIY VRALAHPMFE FSNVTCLDLL SHLWTKYGTI KPAELQKNFQ SMYTPWNTTE
PLESVFLQLD EAIAFSVDGN DPISEAAAVR AGYEVIAHSG LLPLDCKEWR KLPTAAHTLA
HFQQHFSLAD EDRRLTATTG SLGYANVLAA APSLALATTS DTLSLPFSAL SVSQTSVSSP
DMTYCWTHGT SKNRRHTSAT CKNKAPGHRD DATATNTLGG STKERGTATP MVNSSNTDYL
NHITSLNSSV VPSPPSPHTS AIADTGCTGH YITINCPHTD KRPANPSLAV RVPNGAVLRS
SHIATLALPG FSPSACQAHI FPGLASHPLI SIGQLSDDGC TATFSATSLE IHRDTTLLLS
GTRAPTTGLW HLDLTPAKPP NTAHALVPHT PLADRIAFVH ASLFSPALST WCQALDSGHL
ATFPDLSSRQ IRKYPPSSPA MVKGHLDQQR ANLRSTKLPP VCPPTTTEPP AAAVPDFDPP
DAHPIARTHH VFVAHQRVTG QIYTDQPGRF LTPSSAGHND MLVLYDFDSN AIHVEVMKNK
SGPEILAAYK RAHSLFTQRG LRPQLQRLDN EASTALQSFM TSEHVDFQLA PPHLHRRNAA
ERAIRTFKNH FIAGLCTTNP DFPLHLWDHL LPQALITLNL LRRSRINPKL SAHAQLHGAF
DYNRTPLTPP GTRVLVHVKP SVRETWAPHA VEGWYLGPAL NHYRCHRVWI TETRAERVAD
TLSWFPTRIP MPAASSTDRA LAAARDLVHA LQNPSPASPF APLDATQHKA LTDLANLFAT
VAAPAADVPA PEPVPPVRPP TPAPPPAQVR FAVPLVTAEH APALPRVPSE GAHHGHLSLS
HPQPRPPPPH STQPTGNPNP
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