| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48492 |
|---|
| Symbol | |
|---|
| ID | 7203715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011685 |
|---|
| Strand | - |
|---|
| Start bp | 665804 |
|---|
| End bp | 667422 |
|---|
| Gene Length | 1619 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183007 |
|---|
| Protein GI | 219125476 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.439098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGATATTCTG GACTATCAAC AAAATTAGCG AGAGTATCTG AAAATTCGAG AAGGAAGAGC
AACAAACAAC ATGAATCTTC CCCTCTTCTT GATTTTTCTT TTTATGCCTT TGGTTTCGGC
CGCTTTGGGT TCGCATCGCA AGCTTAATCG TGCATTAACG GGCCGTTCAA TTCCAGGACA
GTACATCATC GAGTTAGACC CCAGCATCCC GGATGCAAAG GGTTTTGCAA CCCGCATCCT
CAAACGAGCC TTCCGGAACA ACCTTATCGA GACCTACGAC TACGCGTTGA AAGGATTTGC
TGTTAAGGAT CTCCCCGACA TGCTAGTGAA CTTCATGCTG AATATGGACG ATGTACTCTC
GGTGTCAGAG GACGCCATTG TCGAGGCTGA CGCAGTGCAG ATAAATCCGA CATGGGGCCT
CGACATCACG GACGGAGAAG ATGACAGCCT GTACACTTAC GCGTATACAG GGCAAGGCGT
GAATGCGTAC ATTCTTGACA CCGGAATTCA AGCGAATCAT CCTGAATTCC AAGGCCGTGT
AGAGAGTTGC GTCTCCTATA CCGGAGAAGG TAAATATAAT TATCGCATGC TGATTGTTCT
TCATGTTGTC CGCAATGCAA CAACCCACAC CATCATTTCT TCTTTGCTCA GTGTGTGGAT
CTGATTTGAA TGGGCACGGT ACCCACGTGG CCGGAACTGT CGGGTCAAAA ACCTACGGTG
TGGCCAAGAA GGTGTCGCTG CACGATGTCA AGGTACTTGA CCGGCGGGGG AGTGGATCCT
TCAGCGGAGT TATTGCTGGC ATCGACTACG TGGCCCAGAT CAAGAAGACA GATCCCAGTC
GCAAAACAGT CCTCAACATG AGTCTGGGGG GAGGCCGTAG TACGGCCTTG AACAACGCAC
TCGATTCTGC AGCGGCTTCC GGCGTGGTAG TAGTTGTCGC TGCCGGAAAT AGCAATCACA
ATGCCTGTAA TTACTCTCCT GCGTCTGCGT CGGGAGCGCT GGTAGTTGGT TCTATTGATA
GCAACAACCG CCGTTCGAGT TGGTCCAACT GGGGTAGTTG TGTCGACATC TTTGCAGCTG
GATCCGGGAT CCTGTCGCTG TCGCGAACCG GTGGCGTAAC CACAAAGTCG GGTACGTCCA
TGGCTGCTCC ACACGTGGCC GGTGTTGCAG CATTGTACTT GCAAGCGGGT AGAAATCCCA
ATACTATAAC TTCCGATGCT TTGAAGAACC GGGTGACCCG TACTCGAGGT TCCCACAACA
AACTATTGAG TACATCTGCA CTACCTTCTG AACAAACGCC ATCTCGGGCG CCCACCCATG
TCCCAACTGT TGAGTCCGTG CCTCTGGAAG ATTCAGATTC GTTGGCTCCG ACCAAGGCTC
CCGTTTCTTC CCCCACCAAA GCTCCAGTGC CACAACCTAC TCTCATTCCA ACCAGGAAAC
CTTCTCGCGC TCCAACCAAA AAACCTACTC GCGCTCCAAC CAAAGCTCCA GTCCCTCGGC
CGCCACCTCA GTGTCGGTCT AGAGGTCAAG TTTGCAATCG ATTTCGGCGA TGTTGTAGAG
GGTTGAGATG CTTTCAAACC TGGTCACCTC GGCAAGGACG TCGCTTGGCT TGTCGCTAA
|
|---|
| Protein sequence | MNLPLFLIFL FMPLVSAALG SHRKLNRALT GRSIPGQYII ELDPSIPDAK GFATRILKRA
FRNNLIETYD YALKGFAVKD LPDMLVNFML NMDDVLSVSE DAIVEADAVQ INPTWGLDIT
DGEDDSLYTY AYTGQGVNAY ILDTGIQANH PEFQGRVESC VSYTGEVCGS DLNGHGTHVA
GTVGSKTYGV AKKVSLHDVK VLDRRGSGSF SGVIAGIDYV AQIKKTDPSR KTVLNMSLGG
GRSTALNNAL DSAAASGVVV VVAAGNSNHN ACNYSPASAS GALVVGSIDS NNRRSSWSNW
GSCVDIFAAG SGILSLSRTG GVTTKSGTSM AAPHVAGVAA LYLQAGRNPN TITSDALKNR
VTRTRGSHNK LLSTSALPSE QTPSRAPTHV PTVESVPLED SDSLAPTKAP VSSPTKAPVP
QPTLIPTRKP SRAPTKKPTR APTKAPVPRP PPQCRSRGQV CNRFRRCCRG LRCFQTWSPR
QGRRLACR
|
|---|
| |