Gene PHATRDRAFT_48455 details

Gene Information

• Locus tag: PHATRDRAFT_48455
• ID: 7203688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: +
• Start bp: 537536
• End bp: 539572
• Gene Length: 2037 bp
• Protein Length: 614 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002182855
• Protein GI: 219125160

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.316651
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGAATTCTGA GAAGCTCTCA CTGGACTTCT CATAGTGGAC AAGGATGGCC GTTCAGGACA 
CGAGCGAGGC ATACTTTCGG CTTGCACAGC CTTCAAATTT ACGTGTCTCA ATTTTGGACG 
ACACAGGTTC CAAGAATACA CTATCGCGCC GTTACTACCG GATTCGTAAA CCACAGTCGG 
CTGTCGCGAA AGATGTGGCT CAATTCTGAA GTACACCCTT TGAAAAGGGC GGCTAGCTTT 
GTGGAACTGG CGACAATCAA TCCGAGGGAT TTTGCGAGCC GCAAAGTCGA GCAACTGGTG 
ATTGACTGCT GCAAGCTAAA CTCGTTGGAA GGGTTGCAGG CTGCGGAAGA CATTGCTGAT 
CGATTGCTAC TTGAAAAACG CCGTATGAAG GCCCGAGGCT TAAAAATTGT TGTACCGGCG 
AAAATCTGGC AGAAGATAAT TTACGGATGG GCAGTCCTCG CGGGACGTCA TCGAGTGGCG 
CAGTTTCGAA TCAAAGAGCT TGTAAAACGC GTCGAAGCGG AGGCTGTCAA AGATCGAGCC 
GAATTTTCTC TCCCAGAACA TTCAATAAAT ACGTCAAACC GAAGAACGAT TTTGAGTGAG 
CCGGCGGTCG ATATGTACAA CACAGTACTG TTAGGAATCG CCAATGCATC TCGGTTGTCA 
AAAACGTCCG CGACGGAAGT AGACTCTGTG CTTGATTATA TGGTTCGTCT AAATGAAAAA 
TTCGGGTGGC ATACCAAGCC GAACACAAGG AGCTATACCA ACGCCATTTC AGCTTATGCC 
CAAAGCGGAG GGCTCGGTGA TGGAGACAGA GCAATGGCAG TTCTGCAGAG GATGAAAAAG 
GCGCAACAAA CGGAAAAATA TCTGTACGAA GAACAGTACG GTGTTCTGTA TAAATTCGAT 
GACGAATCGA GCAACAAACG CAAAATTGTT ACGACTGATA CCGTTGTGTA TACAGTCGCG 
ATGAAAGCCA TTACCAGAAG TGGGGCTCAT CCCGAAAAAG CCCTGGATCT TCTTCGTGAA 
GTCACGGAAT GCGAAGGAGG GCCGGCAAAT GCGGACGCTC TTTTATTCGC CAGTGCTATT 
GCAGCTTTTC GTCGTTATGT AACAAAGTGT TCTGATGTGA GTGAGAGAAG AAAACTTGCT 
AAGGGAAGCG AGGAGGTGTT AAGGATGATG CTTCAATATG AGACGATCTC CACCGACTTG 
AGCGATGGCG CGCGAGGAGC CTTCAATGCA TGTCTTGCCG TGTGGGCTGG TTCTGCTCTA 
CCAGAGTCCC CTTTGCGGTG CCGAGAGATT ATTCAGAGCA TGATCGAACA TCGGATCGGA 
CCAGATACCA TTTCGCTGAA CACCTGCTTA CACGCGTGGC TGAAGGCAAG CCGTTTACAC 
AGGAACGCAG CCAAAAGCGC GGTAGAGCTT CTTTTTTCCC ACGTCAGTCT CGCAACGACG 
AACCCAAAGT CATCCATTGC AGACTTTCAA TCATATGCAT TGGTAATACG CGTTTTGGTG 
AGCGCTCGAG GAGATCCAAC AAGGCTTGTT CAGGCGAGAG AACTCCTCCA GAACCTTATA 
AATGAAGTGA ACCTTGGGCG AATGAAGACG GCGGAAAAAT CTCCAGCTCC CTTTACGGCA 
GTGCTCATAG TTGCTTCTGA AATGCCATCT TTGGCCAAAG TCTCATCTCT AGATACTGAA 
GTCTTTCAAC GTGATGATTC CATACTTGAA CAAGACGCCT TTTCCATTGC TTGCCGAACA 
TGGGATGAGC TAAAGGACGA CAGATTTGGT CTTGGGATTG CTCCTGATCA TCACGCCTAC 
AGTGCCTTTC TCAAATGCAT CAAACGACAC TGCCCCGAAA ATTCTTCGGA ACAATCGTTT 
CGGGTCCGCT CTATATTCTC TGACGCCTGT GAAACCGGGC ACGTGAGCAA GCTCGTCTTG 
AAAGTTCTAG AACGCTTCTC GAATTGGCAA AATATCATTG GGGTGGAAAA GGGTACAAAA 
GTGCGAGGGC TGCCGAATTT CTGGTGGAGA AACGTTGCGA AAGAATGGAT CGACTAG 

 

Protein sequence

MWLNSEVHPL KRAASFVELA TINPRDFASR KVEQLVIDCC KLNSLEGLQA AEDIADRLLL 
EKRRMKARGL KIVVPAKIWQ KIIYGWAVLA GRHRVAQFRI KELVKRVEAE AVKDRAEFSL 
PEHSINTSNR RTILSEPAVD MYNTVLLGIA NASRLSKTSA TEVDSVLDYM VRLNEKFGWH 
TKPNTRSYTN AISAYAQSGG LGDGDRAMAV LQRMKKAQQT EKYLYEEQYG VLYKFDDESS 
NKRKIVTTDT VVYTVAMKAI TRSGAHPEKA LDLLREVTEC EGGPANADAL LFASAIAAFR 
RYVTKCSDVS ERRKLAKGSE EVLRMMLQYE TISTDLSDGA RGAFNACLAV WAGSALPESP 
LRCREIIQSM IEHRIGPDTI SLNTCLHAWL KASRLHRNAA KSAVELLFSH VSLATTNPKS 
SIADFQSYAL VIRVLVSARG DPTRLVQARE LLQNLINEVN LGRMKTAEKS PAPFTAVLIV 
ASEMPSLAKV SSLDTEVFQR DDSILEQDAF SIACRTWDEL KDDRFGLGIA PDHHAYSAFL 
KCIKRHCPEN SSEQSFRVRS IFSDACETGH VSKLVLKVLE RFSNWQNIIG VEKGTKVRGL 
PNFWWRNVAK EWID