Gene PHATRDRAFT_48444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48444 
Symbol 
ID7203682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp484692 
End bp485643 
Gene Length952 bp 
Protein Length153 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182847 
Protein GI219125144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACGTGAAGT ACAACACTGG CTGAGATATT GGACAGCGGC GACAAAAAGG AGAAAGTGCA 
GAAAGCAACG CTAGGCTTTG ACAGTAAGGG GGATCAGCAC GAATTCATCC TGTCACAAAG
GGGGTTCGTT GGGATTAGCT TTTACTCGCA AGCCGCCGAA GAGATTTCGG ACAACGAAGA
ACCCCACGAG CCGTTGTTCT CGGGCAAAGC TGCGAATGAG CAAGCACTCG GTCCGGCACA
GTGCATTCTA GAAAAAAAGA TGTTCTCGCT GTCCGGGCAT GTTGCCAAGC CCGTCAGCCA
GAAGAAGATA TCGTAACGTT TTACCAATCC TATTGCACGG AGACGCCGCC TTTGCCGGGC
AAGGGGTAGT CTACGAGACC ATGCAAATGG CCGAGGTGCC CGATTTTGAT GTCGGTGGAA
CCATTCACGT CATCATCAAC AATCAGATTG GCTTCACCAC CAACCCCCTA CATTCGCTCT
CAATGCCCTA CGCGTCGGAG TTGGGCAAGG CCTTCAGTTG CCCCATCTTT CACTGCAACG
GCGACGATCC CCTAGCAGTA TCGACGGTAC TCGAGACCGC CGTCGAATGG CGTCACGAAT
GGGGCATGGA TGTCATTATC GAGATGGTCT GCTACCGTCG TAATGGTCCC AACAAATTGG
ATCAGCCGGC CTTTACACAA CCCAAACTCT ATAAGGAAAT CTCTCAACAC CCACCAACCC
TGGATATTTT CGAAAAGTGA TTGATTGAAG AAGGAACCTT ATCCAAAAAA GATGTTAAGA
GATCCGTGAC TTTACGCTGG AAAGCTACGA GAAGGATTTG GAAGCTTACG AGATGTATGT
GGAAAAGGAG ACGGATTGGT GGAGCTCCAG GTGGACCGGT TTCAAAGGGC CATCGCAGAT
TAGTCGTATT CGTCCTACCG GCAATGAGAT GGACTTTGCG CAAGATAGGA AT
 
Protein sequence
MLPSPSARRR YRNVLPILLH GDAAFAGQGV VYETMQMAEV PDFDVGGTIH VIINNQIGFT 
TNPLHSLSMP YASELGKAFS CPIFHCNGDD PLAVSTVLET AVEWRHEWGM DVIIEMVCYR
RNGPNKLDQP AFTQPKLYKE ISQHPPTLDI FEK