Gene PHATRDRAFT_48422 details

Gene Information

• Locus tag: PHATRDRAFT_48422
• ID: 7203671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: +
• Start bp: 416852
• End bp: 419069
• Gene Length: 2218 bp
• Protein Length: 702 aa
• GC content: 58%
• Product: predicted protein
• Protein accession: XP_002182831
• Protein GI: 219125110

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATGCA AGTCTTCGAA AGCCGCACCG TCAGAACGGG GCTCGCAAGG CGCTGCTAAA 
CGCACTAGTA TGGACTCCAG AACCAAACGG AGCAGTCGAG GCATCTCCCC AAAGCCATCG 
TCGCCGTCGT CGTCACCGTA CTTGGGAACC AAGTCGACGG CGTCCTACGA CACCACTTCG 
GTCCAGAACG ACAAACTCTA CAAGCTCCTC GTCTCGGCAC AGCAAGGCAA AGTCGACGGC 
GCCGTCCTCG TCCAGAAAGT GCGCAAGTTC ATTACCGTAA ATCCTGCATT CGCCGCGTAC 
CAAAACCCCA ACACCAAATC CACGCCACTG CACATGGCTG TACGTTTACT GGATCTAACG 
GATCTCTCGT CTGCCGCCGC TGCGATTGTT CCTAACCTCG TCACGGCGTA TACGGCGGCC 
GTCGCGACAC GGGACGCGGC TGGCAATCTA CCACTCCACT ACGCCCTCGC TCCGACCTCG 
CACTTTGGTG GCGGACCCCG GACCAGTTTG ACCCCACGGA CCGCCGTCGT GCAGGCGCTC 
TGGACCGTCG CACCGAAATT CGCCCTCGCG TACTGGAATC GGAACGACGT GGTGTACGAA 
TCGGGGGACG CCACCGGTGG ATGCTCCCCG CTATACAGAG TTCTGCAAAC TCTACCGGAC 
GACTTTGTGG CGCATGCCGC CACCACGGTC GAATACGTAC ACGTTCTCTG TCATTTGGCG 
GCTGGAACGG AACATTACAA TACCGCGAGC AAGGCCTTTG TCAGTCTCGG CAACACCAGT 
GACGCCGACA AGCCTCTCGC CCTGCTCTAC CGACGATTCA CGCGACAGTT CGATGCCGCC 
GAAAAATTCT TCGACGGAGA CAACTCGCGT GACGAAGTAG TGCAACACCG ACGACGGTAC 
AAGACGGCGG CAGGGAATAC CTGGAAGATT ATTGAATGTC TTTTGCAGCC CCACGCGCCC 
GCTTCTTCGT CCTGGCAAAT TGTCCACCGC GCCGTACAGG TGGAAACCCC ACCCGACCTC 
CTGAGATATA TTGTGGAAAC CAACGCTGAA GATTTGACCA CGGCCGACGA AACGGGAAAT 
CTGCCCCTGC ATCACGCCGC CATGTCCAAG CCTCACTCGT TGTCGGGTGC GGCTTCGTCT 
GGCGGATTTC CCGCCTTTTA CACGAAATTC ATTGTGGATG AACTCTTGTA CAAGTTCCCC 
GACGCGGCCA GTATACCCAA CGCGGACGGT AAATACCCTC TCACACTGGC TGTTCAAGCG 
GGTAAACAGT GGATTGGTGG TGGCATCAAG AGCCTTTACG AAGCCTATCC GGAAGCCCTC 
ACACAGGTTA AACTCAATGA ACATAAAGTG TTACGCCAGG CGCTTTCGAT GGATGTCGGA 
AGCAGCAACC CCAATTCACC AACAGTCGAC GACAGGGAAG AAAAACTCGA CTCAATCATC 
CGAGACGAGC AGCACGACGC CATTATGCTC GTTCAGCAAG AAACAGTGGA CGTCCCGGAG 
GTAGTCTTTT CTATGTGGGC TCATGAAGAA GATGCCGGCG TGCAAATGCT CGGTTGCGTG 
GCACTCCACC GCATGGTCCG GAATGTGAAC GACCCCGCCG ATACCTTACG AATAGCCCTC 
TCCGCCGTAG CAGCGATTGT CAACGCCATG AAGGCGCACC CTAATGAAGT CATTGTGCAG 
GAAAAAGCCT GCCAAGTATT GCAAAGTCTC GCCGTCGTCG ACGGTCACCG GGAAGTATCC 
TTTGTCGCAT CCGGTGCCGT TGCGTCTATT GTTGGCGCCA TGCAGGCCCA TGTCAGCGAC 
CCCGGCGTCC AGGAAGAAGC CTGCACCGCG CTCGCCGCCG TGATTCGTGT CGGTGGCGCC 
GAGCGCGCCA CCATTGTGGC CAGCGTTAGC GGCTTGACCG CCATGCTCAA CGCCCTCGCA 
GCCCATCCCG ACGTGGTCGG CGTCCAGGTC GCGGCACTTA ACGCCCTCGT CATGCTCACA 
TCCTTTCCCC GCGCCAACCT ACCCGATGTA CCGCGATCCC AAACGGAAGC TCTCTTGTTA 
GCGGCCCGCG ACAAATTCCC GCTCGAATGC CACGCACACG TCGAAACGCT CCGGTCACGA 
CTGTCTTGAA ATCCGTGGCG TGGGAGATGG CGATTTGGTG CCCACCCACC GGAACAAATG 
GATAGTGTAC GTCGGCTCAA TGGCTGCTGG GCGGAAGTTT CCAAGAGGGG TGTGACTT 

 

Protein sequence

MGCKSSKAAP SERGSQGAAK RTSMDSRTKR SSRGISPKPS SPSSSPYLGT KSTASYDTTS 
VQNDKLYKLL VSAQQGKVDG AVLVQKVRKF ITVNPAFAAY QNPNTKSTPL HMAVRLLDLT 
DLSSAAAAIV PNLVTAYTAA VATRDAAGNL PLHYALAPTS HFGGGPRTSL TPRTAVVQAL 
WTVAPKFALA YWNRNDVVYE SGDATGGCSP LYRVLQTLPD DFVAHAATTV EYVHVLCHLA 
AGTEHYNTAS KAFVSLGNTS DADKPLALLY RRFTRQFDAA EKFFDGDNSR DEVVQHRRRY 
KTAAGNTWKI IECLLQPHAP ASSSWQIVHR AVQVETPPDL LRYIVETNAE DLTTADETGN 
LPLHHAAMSK PHSLSGAASS GGFPAFYTKF IVDELLYKFP DAASIPNADG KYPLTLAVQA 
GKQWIGGGIK SLYEAYPEAL TQVKLNEHKV LRQALSMDVG SSNPNSPTVD DREEKLDSII 
RDEQHDAIML VQQETVDVPE VVFSMWAHEE DAGVQMLGCV ALHRMVRNVN DPADTLRIAL 
SAVAAIVNAM KAHPNEVIVQ EKACQVLQSL AVVDGHREVS FVASGAVASI VGAMQAHVSD 
PGVQEEACTA LAAVIRVGGA ERATIVASVS GLTAMLNALA AHPDVVGVQV AALNALVMLT 
SFPRANLPDV PRSQTEALLL AARDKFPLEC HAHVETLRSR LS