Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48392 |
Symbol | |
ID | 7203652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 312453 |
End bp | 313725 |
Gene Length | 1273 bp |
Protein Length | 273 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182813 |
Protein GI | 219125073 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCGCAATCA ATCGATAGTT TTGTAAATGA ATTTGGAGGA CGGCTCGGAT AAGAAGAACC GTCCGCCCTA CGCGATTGGA ACGAAGCTTA GCAAAGTATG TTCTGTTTGT CGAGGCCTGT CCATCCATAG CCAAGGCATC GCACGTTTTT AGCCCCGTCG AGCAAAAACC AGTGGGCGGT TTTCCACCTG CCAAACTGCA TTCTAACCTC TGTGTGTATA TACGTTCCTG GTTCGTGTAG TACTTTCCAG GGCATGGCTG GTACAAAGGT GTTATAACTT TTTTTCTCCA AAGCCGAGGG GTGGTACACG GTAACGTATT CCGACGGAGA CAAGGAAGAT TTGATCGTAG ACGAACTCCA GAAAATTGCC AACGTTTCCC CCACAAAGTA TACGAGCACT GACAGCCTCG GAAACATAGG CACCTTGCCA TTTCCAAACA AAGCTCTAAA AATGCCCTAT AATGATACAG CTACCGAACC TCCCGAGAAA AAGGCGAAAA TTCAATGTTC TCCAAAAGTC TCACTTTCGC TCTGGGAGAT TCACGGCCTC GACGAAAAGG TGCCGATACA TATCCCCAAC TTACCGACGG CACTGCGGGA AAATCGGCAA AATATAGCAG ACTTTTTCCT TTTCGTATAC GAACGCCAAC GGATCTGGGA GCGACGTAAC CGAGACGAAG CCCAACCGTG GTCTCAAAAC CCAGTATTCC TCGATTGTTC CTTTTGCAAC AACTACCGAG AACTGGATCG CGGTACGCAG TTCTTCCATG CGCATGTTCT AGATCTGAGA GATAGCATGG GGCCAAATGT TTCAAAGCTG GACTGGCTAA CCGCGGTGCT CTGGGCATCT TACGTATATC GCCAGGTCAA CAAGGTTGAA AGTTTCTTGC AACTGGGTTT TCCGGAACCA CGAGACGCGG TGTCGTTTTT GAAACGCGCC TCCTCACAAT TCAAGGAAAA GGGTTGTTCC TTCTTCACCG GAGCGCACCA AACTCAAGGG TACGTCAACT ATCGACGTCA TGTTGAAGCT GTAGCCAGGA ACGACGGTAA ATTGTTGCGA GAAGTCAGCA AAAAGATCTC CAATGCGTCA AATACAAAGT TGTGCTTGAA GCATCTACGT GCATTTCCTG GGATTGGGCA ATTCTTGGCG TGGCAGATGC TTTGTGATTT GCGCGAGTCC TATTGTATTG ATGCCAAGGT GGACGATTAC TGCGAGCTTG GACCAGGAGC CATAAGTACG TGCAATCTTA AATTACGTGT TTTCCCATTG TAA
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Protein sequence | MPYNDTATEP PEKKAKIQCS PKVSLSLWEI HGLDEKVPIH IPNLPTALRE NRQNIADFFL FVYERQRIWE RRNRDEAQPW SQNPVFLDCS FCNNYRELDR GTQFFHAHVL DLRDSMGPNV SKLDWLTAVL WASYVYRQVN KVESFLQLGF PEPRDAVSFL KRASSQFKEK GCSFFTGAHQ TQGYVNYRRH VEAVARNDGK LLREVSKKIS NASNTKLCLK HLRAFPGIGQ FLAWQMLCDL RESYCIDAKV DDYCELGPGA ISTCNLKLRV FPL
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