Gene PHATRDRAFT_48392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48392 
Symbol 
ID7203652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp312453 
End bp313725 
Gene Length1273 bp 
Protein Length273 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182813 
Protein GI219125073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGCAATCA ATCGATAGTT TTGTAAATGA ATTTGGAGGA CGGCTCGGAT AAGAAGAACC 
GTCCGCCCTA CGCGATTGGA ACGAAGCTTA GCAAAGTATG TTCTGTTTGT CGAGGCCTGT
CCATCCATAG CCAAGGCATC GCACGTTTTT AGCCCCGTCG AGCAAAAACC AGTGGGCGGT
TTTCCACCTG CCAAACTGCA TTCTAACCTC TGTGTGTATA TACGTTCCTG GTTCGTGTAG
TACTTTCCAG GGCATGGCTG GTACAAAGGT GTTATAACTT TTTTTCTCCA AAGCCGAGGG
GTGGTACACG GTAACGTATT CCGACGGAGA CAAGGAAGAT TTGATCGTAG ACGAACTCCA
GAAAATTGCC AACGTTTCCC CCACAAAGTA TACGAGCACT GACAGCCTCG GAAACATAGG
CACCTTGCCA TTTCCAAACA AAGCTCTAAA AATGCCCTAT AATGATACAG CTACCGAACC
TCCCGAGAAA AAGGCGAAAA TTCAATGTTC TCCAAAAGTC TCACTTTCGC TCTGGGAGAT
TCACGGCCTC GACGAAAAGG TGCCGATACA TATCCCCAAC TTACCGACGG CACTGCGGGA
AAATCGGCAA AATATAGCAG ACTTTTTCCT TTTCGTATAC GAACGCCAAC GGATCTGGGA
GCGACGTAAC CGAGACGAAG CCCAACCGTG GTCTCAAAAC CCAGTATTCC TCGATTGTTC
CTTTTGCAAC AACTACCGAG AACTGGATCG CGGTACGCAG TTCTTCCATG CGCATGTTCT
AGATCTGAGA GATAGCATGG GGCCAAATGT TTCAAAGCTG GACTGGCTAA CCGCGGTGCT
CTGGGCATCT TACGTATATC GCCAGGTCAA CAAGGTTGAA AGTTTCTTGC AACTGGGTTT
TCCGGAACCA CGAGACGCGG TGTCGTTTTT GAAACGCGCC TCCTCACAAT TCAAGGAAAA
GGGTTGTTCC TTCTTCACCG GAGCGCACCA AACTCAAGGG TACGTCAACT ATCGACGTCA
TGTTGAAGCT GTAGCCAGGA ACGACGGTAA ATTGTTGCGA GAAGTCAGCA AAAAGATCTC
CAATGCGTCA AATACAAAGT TGTGCTTGAA GCATCTACGT GCATTTCCTG GGATTGGGCA
ATTCTTGGCG TGGCAGATGC TTTGTGATTT GCGCGAGTCC TATTGTATTG ATGCCAAGGT
GGACGATTAC TGCGAGCTTG GACCAGGAGC CATAAGTACG TGCAATCTTA AATTACGTGT
TTTCCCATTG TAA
 
Protein sequence
MPYNDTATEP PEKKAKIQCS PKVSLSLWEI HGLDEKVPIH IPNLPTALRE NRQNIADFFL 
FVYERQRIWE RRNRDEAQPW SQNPVFLDCS FCNNYRELDR GTQFFHAHVL DLRDSMGPNV
SKLDWLTAVL WASYVYRQVN KVESFLQLGF PEPRDAVSFL KRASSQFKEK GCSFFTGAHQ
TQGYVNYRRH VEAVARNDGK LLREVSKKIS NASNTKLCLK HLRAFPGIGQ FLAWQMLCDL
RESYCIDAKV DDYCELGPGA ISTCNLKLRV FPL