Gene PHATRDRAFT_48362 details

Gene Information

• Locus tag: PHATRDRAFT_48362
• ID: 7203572
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: -
• Start bp: 236177
• End bp: 238399
• Gene Length: 2223 bp
• Protein Length: 622 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002182923
• Protein GI: 219125303

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.125944
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGATGCCCCT CCACGTTTTG GTGGGAACTG GGATGCTGAC GGAGTTGCTG CAAATTTGGA 
CGAAGTTGAA CCGCCATCGG CTACTAAGCG AGGTAGATGG TCTTAGAATG CGGTCTTGTT 
AAAAACCGAG AGCCAGGTCT TTCGTGCACC TATTTCTCCA AGTGTGTATG TCTTCTTATG 
GAAACAGACC GCCTTACTCT TTTCCGACGA ATTTTCCGCA CCTCCATCGT GTGAGACTCC 
ACCAAACGTG TCCAACCTTT AGTCCGCTGC CCTCATCGAC AAGTCGCCAG CTTTGGTTAT 
AACCCAGTGA CATTGATACT TGCATGGCGT ATGAATGTAC ATTGACCAAC ATTTTTTTCG 
CAATGACGAC TCATCTATTT GCTTCGATTC TTTTCGTTTT CTGGATCACT TGCCTCGTTT 
CCGATGCCGA GAACGGAAAC TCGATTGCCA CAGACCCGCA CGCATTATCA CCTAGTGAGT 
TGTTTGCCAT GGACCCTGTT CACTGGACTC GAATGGAAAA GTTTTCTTTG TCGGCGAGAG 
ATTTGGCACG GACACGCCAA AGACAAGTAC TGCTCGATAT TTTCACATCA CTTCGGATGT 
ATTCAGCTAT TTCCAGGCCT TTGCACAACT GGTTTACCGA ATGGCCATCC ATCATCGGGG 
ACTGTTGCTC TTTTACTGGA GTCGAATGCA ACACAAATGG GTTGATTACT CATTTGATGC 
TCACGAACCT TCGTCTGGAA GGAAAAATAC CGTCCACAGT GAACTATTTG AGTGAGCTGG 
TCCAGCTTCG GCTGGATTGC AATTCCTTGA GTGGATCACT GCCAACAAAC CTGGCCACGT 
TGTCTAAGCT ACGTTGTCCA TCAATACAAG AAAGTAGCAG GAATCTGATA TCACCGGAAG 
CGCCAGCCGC GCCAGCAGTG TATCCAACCA TCGGGATTCC GAGTATACCA ACGTCTTCCC 
TGGAGCCTTT GATTACTCCT TCTCGAGCAC CAGCAACCTC TACAATGTCG CTGCCCCTCG 
TAAGTACTCA ACCGTCGGGA ATGCAGTCGT TGTGGCCGAT GCAGCCATCT CCCTCGCCGA 
CTCTGGTAGC AAACCCTATA CCTTCGAATT CACCTACCGA GAACCCAAAC TTAGCATCGA 
TAGGGACATT GAGTGTAATT TTACCGCGGG CCGCGACTGG GGGCTCTCAG AAGCGCGGCA 
TAATCGCTGG ATCCGTCACT AGCGTGCTTT TCATTGGATT TGTGATTGGT TTGTTTTTGA 
AATTACGATT GAGGCGTCGC ATTGCGAAAG GCCCCGGTTG TAGTGCCAGC TTCGCTTCGT 
CCGAAGGATT TGATGAGATT TCGTTCGAGC CAGGTGGCCT CTTCTCTATA GAGGAGGAGA 
ATTCCACAGA TATCGACGAG CGGTCAGTAG TTACGACTGC AGCGAGTTGC TCGTCTATTT 
TAAAGCCAGG TCGCTTCTCT ACATCTCTGG ATAGCAAGGA AGAGGAGGTA AAGAGAGGCC 
GCAGAGTTCA TTTTGATGGA GAGGACAACG ATGACGATTC CTGGACCACG GAAGAGGAAC 
AAGCTAAACA AATTCAGAGC ACCAGAGAAG AAGCAAGAGT GGCCGCCGTC GCAACTCCGT 
CAACTATCCG AGACCGGGAT GGCTGGGTCT CTTGGATAAT GAATCCTGTG TTTGATGCGA 
GAACATGGTG CGGAACTCCC GAGCCTATTT CAACATTTTC TATTAATGGC GAGGACTTGC 
TCGATGTTCC GGATTCTCCT TCAACACAGT CTTCAGTAAA CTCGGATACT CCTATTTTCC 
CTCAATCCTC AGGCACTTCT TCCGAAGTCT TTTTGGGTTG GGAGACATCT TTGCAGCACG 
AAGCAACACC GAAACATCGA TGGCGACCAC TTTTGGGCAT TGTCAGACGA TATAATGACG 
AGACGATGGA TTGTACGGTC GCTTATTCTG AGCCCGCGCC GGAGTACTTT TTGGAAGCCG 
GTACAGCGAG GCATGTAGGT ATTGACGATA CGGCCGCCGG AGAGCCACCA ACAGCGAGGC 
CAGAGCCGTG GGCGCTCCCA AGTCAGCCCT CATCGGCTTT GGCCTCAGCT GTGAGCGAAG 
AGACGTATCA CGTCGTGGAG GACTTGCCGC GAACGCCTGG TTACGGAAAC GCTGCAATAT 
CAAACGCTGG TCAAAATATG GTAGAAATCT AAACTATATC TGCTGACGCC TTTCTAAATC 
TGA 

 

Protein sequence

MAYECTLTNI FFAMTTHLFA SILFVFWITC LVSDAENGNS IATDPHALSP SELFAMDPVH 
WTRMEKFSLS ARDLARTRQR QVLLDIFTSL RMYSAISRPL HNWFTEWPSI IGDCCSFTGV 
ECNTNGLITH LMLTNLRLEG KIPSTVNYLS ELVQLRLDCN SLSGSLPTNL ATLSKLRCPS 
IQESSRNLIS PEAPAAPAVY PTIGIPSIPT SSLEPLITPS RAPATSTMSL PLVSTQPSGM 
QSLWPMQPSP SPTLVANPIP SNSPTENPNL ASIGTLSVIL PRAATGGSQK RGIIAGSVTS 
VLFIGFVIGL FLKLRLRRRI AKGPGCSASF ASSEGFDEIS FEPGGLFSIE EENSTDIDER 
SVVTTAASCS SILKPGRFST SLDSKEEEVK RGRRVHFDGE DNDDDSWTTE EEQAKQIQST 
REEARVAAVA TPSTIRDRDG WVSWIMNPVF DARTWCGTPE PISTFSINGE DLLDVPDSPS 
TQSSVNSDTP IFPQSSGTSS EVFLGWETSL QHEATPKHRW RPLLGIVRRY NDETMDCTVA 
YSEPAPEYFL EAGTARHVGI DDTAAGEPPT ARPEPWALPS QPSSALASAV SEETYHVVED 
LPRTPGYGNA AISNAGQNMV EI