Gene PHATRDRAFT_48352 details

Gene Information

• Locus tag: PHATRDRAFT_48352
• ID: 7203566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: +
• Start bp: 209153
• End bp: 211609
• Gene Length: 2457 bp
• Protein Length: 336 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002182793
• Protein GI: 219125032

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AACATCGGGA AGGGCAGCAC TAGAAAGGCA CAATACCCAT GGCAATGCCG AATCATCGCC 
ATCCCCAGAA GTATTATACA AAATGGTTCA AAGCGCTTTT TTTCAATTCG AATCGTAGTA 
GCAGGGCTGT CTTTTGTGCT GTGCTGGCCG TAGGATGCCT TTGCCTGGCA TTTGTCTATC 
TGGAAACCGA CATGGACAGA AAAATCAGAC CGCAAAGCGT GTTGATGCAT CAAACTCCGA 
GCGATCAGAA AGGCGATGAA GAGACAACAG CGTTGACGGC TTATTCGTTA TTACGGCGTG 
ATCGTTCAGG TGCCGCTATC TTGGACATGC TCCTCGCTCA CGCTTACTGC AGCGCCAAAA 
GCCTGCACTA TGGCGGAGTT TGCCTGGAAA TTAATTCTCA GTATCCGCAT CAACCGGCTC 
ATGAAGAGTT ATTGAATTCT TTGGGCTTAG AAAAAATCTT TTTGCCCTTT GTTCCGTGTC 
CGTCTCGATC AAATTCGTCA GCCATAGTTC TCCCGCGTGA CATTTATTTT GCTCCTGACA 
CGGCTATATG GACGGAGGAG TGGTTGTCCG AAATGCGGTT ATTTCGCCGT CCTATGCCTC 
CAATGGTGGG ACAGCGGCCC GTACAGGTCG CTGTTCATAT TCGGCGTGGA GATGTTTCAC 
TCTGCATGAA AGAAGAATCG TTTCGGTATC TCCCCAACCT CCACTATCAA AAAATCTTGG 
AAAACATGGT ACTGCCGCAG CACCCCAACG CCAACATTAC GATCTTTTCC GAATCTGAGA 
ATGCTGATGA TTGGCACGGC CTGTCCAATT ATCATCTCGC CTTGGATGTG AACCCTGTGG 
ATGTATGGAA ATCCATGGTC GACGCCGACG TCTTGGTTAT GTCGAAGAGT AGTTTTTCGC 
TGGTACCGGC TGTCTTTAGT GCAGGGGAAG TCATTTACAC TCCTTTTTGG CACAACCCTC 
TATCTACATG GAACATTGTG CCCGAAAGCA TTGTCGCAGA GAGCCAGCGT GAGGTCAATC 
GCCTGCAGCA GCGTTGTCAC CTACAATGAA AGCGTGGAAG GATATGTTTG TTGATGGTTC 
AGCAAACCAT CTTATCGAAA TGTGGCAATC ATCAAAAAGG TTTTCTTGCT CTATCCAAAG 
CTGTTAAAGT CGGCTTTTTT CAATGCATTT ACTTTGCCGT CTGTTTTGTG TATGGATAGT 
GTACTTTGAC GCAAAAACCG TGTTGAGGAG ACCGTGTTGG GGAGGGCCTG GTGACGATGA 
ATGAACGGTC TAATGGTGGC AGCGCTACTT CCGCTGTTAG AAACGGTATG AGCGACGAAG 
TACTGCTATT GCAATTCAAT GGACAGCCCA ACAATAACTA CATTTCTGTG CTGTACTTGT 
CAGCGGCCGC GCAGGTCGCA GCTCAAGTAT TGACATGCGT GTCCTTACCG CTGAATCTGA 
TAGGAGTTCA GGGTAATAGG AAGCAACTCC CTTTCCTAGA TCTGCTGAAA CCTTTGGGTA 
TATTTCTGGT TGTTGTTCAT TGGATGGTTT TGGAGGGAAA TAATTGGCGC CATTCGACCC 
CAGTATCTTT CTTGTGTACA TTTCTACATA CGTAAGCGGG GAGCCACGAC ACCGTATGGA 
CGAATGCAAT TAATTGTTTG AAGGATTCAT CCCAATGCCG GAGCATCCGA AATATCCTCA 
CAATTTCATT CCATTCGTCA CCCAGCATTT TTCCCACCAT GGCAGTCACC GAACCCGAGA 
CTACGACAAG CAACACCGTC GAACAGATTC CTTCCGTATC GGATCCCAAG AGCGGCGAAC 
CTAAGGAAGA GCCGACCGAA GAAACAATCG AGAAGGGAAT CACGGAAGAA GAGTCGAACA 
CCAACAACGA CGCCAAAGAC GAGGCCGTCC CCGAGATCAA CGGAACTTCA ACTACAAAAG 
CTAACAACAA CACTTTAGCC TCTGAAGGTC CCGTCGTTGA ATCCCCTGTC AAAATTGACG 
CCACTGAGGA GGACACGCGG AAGCGCGCTA GCCCTGAACC GATACCAGAG GATCACCCCG 
AAGCTAAAAA GCCAAAAGAC AAAAGCGGCG ACGCGAAAGA GACCCATGAA GACATGAAAG 
TGATGCCTGC TGAACCTTCC AGCAATGATA GTGACCAGCA ACTCGTCGAC GACTCCAATC 
AAGAAACGAG TGCCAACACT CAAGAAACTG CGGATGAGTC GACCGACTAG TAGGAATTCA 
GGCGACTGAT GGCTTATTAG GCACTTGCTA TACCACGCTT TCGGAGCAAG AAGGTTCGTC 
AGCGTGGCTG TTGATGAGTG ACTACTAGAT CTGGCACCAG CTACCAGCTC TCTGGAAGAT 
ATGGTAGTAA CAGATCAATA ACACTGACCT AAGTAACCGA ATTCATAGTC GACGTATTTC 
TCCTTTCTAG CGACGACAAC CTAACAGTAA GCGCGTCGAG GTTTGCGGCT GTTAGAA 

 

Protein sequence

MAMPNHRHPQ KYYTKWFKAL FFNSNRSSRA VFCAVLAVGC LCLAFVYLET DMDRKIRPQS 
VLMHQTPSDQ KGDEETTALT AYSLLRRDRS GAAILDMLLA HAYCSAKSLH YGGVCLEINS 
QYPHQPAHEE LLNSLGLEKI FLPFVPCPSR SNSSAIVLPR DIYFAPDTAI WTEEWLSEMR 
LFRRPMPPMV GQRPVQVAVH IRRGDVSLCM KEESFRYLPN LHYQKILENM VLPQHPNANI 
TIFSESENAD DWHGLSNYHL ALDVNPVDVW KSMVDADVLV MSKSSFSLVP AVFSAGEVIY 
TPFWHNPLST WNIVPESIVA ESQREVNRLQ QRCHLQ