Gene PHATRDRAFT_48350 details

Gene Information

• Locus tag: PHATRDRAFT_48350
• ID: 7203809
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: +
• Start bp: 197400
• End bp: 204412
• Gene Length: 7013 bp
• Protein Length: 1773 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002182790
• Protein GI: 219125025

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0719027
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAGCG ACCGAGCCTA CAGCAACGGC AATCGCTTAC CTTTACCCGA CGACGAGTCC 
ACGGAAGGAT CACATGAGTC GTCACAGCTA GTGGTGGCCA CGAAAGAAGA TGAAGAACGC 
AACGAGGTTA AGCAAGTACA GTTGCTGGCT CGCAGAGAAA CAAATCATGT ACGGCTGTGG 
CGCCTAGTTG TCCTCGTTAT GATTCTAACT ACAGGAGCAG TGGTTTCAGC ACTGACTTTC 
ATTTTTTTAA ACCGGGAAGA TGAGGAGGGC GCCGAGAACA ACGCAAGTTA ATCATCTGTG 
AGAGATCATG TGATTCCGCG TCCACATTTT TTAGTCTCAC GTGTTTTCTC CCATTTTTGT 
TGCAGTACTT CTCCTTCGCT CATACCATCG AAGATGCGTC CCAGTTTCAC ATCACGAATA 
TGAATCTAGC GTTTAAGAAT TTAGGAGAGA TTATTACAAC CGCGGCGCAA GCCACCAACG 
CGTCATTCCC TTTCGTCACC GTTCCAAAAT TCGAAGTTTA CGGCCGCCAT GCGCGCCTTC 
AGTCAGGAAT TGAAACATTT ACTTTCAATC CGTTCATTAC TGACGAGACA AGGGCGGCCT 
GGCAGGCCTA CTCAATCCAA AACCAGGGAT GGTTGAAGGA AAGTCGAGAT ATTTTTCTTG 
GCGGCGACGA AGGGAACCAC CAGGACTACA TCGATGGGCC CATCACACCG ATTATTTGGC 
AGAGACAAGC AGACGGAAGC CCGATTCCTA CGCCCGGACC GGATACATAT GCTCCTGTTT 
GGCAGGTAAG CGTAGGGGAG TGCCACTGGC CACTTAGTAT TTTGCAATCA AACAACCCCA 
CGCTAACTTA AAGAAACTAG AAGTCACTAA CACTTCTCGC ATGTGCTTTG CCGTTTGCAG 
ACATCACCTC CAATCTTTAA TCCAGCAACC GTAAATTACA ACATGTTTTC TGAGCCGTTC 
TCCAAGCGCA TGTACCAAGT CATTCTCAAT CTTAGAGAAG CAGTCCTTTC AGAGACCCTG 
GATCTTACTC GTCTTTCCGG AAGCGCAGTC GCTCCAGAAG ACCACGAAAT CATGCACGAT 
GCTTTTGTAT CAAGCATAGA CACTACCACA AATGTGACAG GGTATAAGCA TCCCCACAGC 
GTGCTGGTCC AGCCTATTTT TAGTGAACTC AACAATAGGA GTGCCACGAT CGTCGGATTG 
TTACAAGCCG TCATTCCGTG GGACCGATAT TTCACTGACT TGTTACCACA AGGAGTGAGC 
GGTATACACG CTGTTCTTCG CAACACGTGC AATGAATCTT ACACATACGA GGTGAAAGGC 
AACTCGGTAC GTTTGTCGTT TTTGTACACA AAATGTAAAA GCCTTTGTTT TGTACTGACA 
ACAGTCCTTG TCCGAAGTAG GCTATCTTCT TAGGTCCGGG AGATCTGCAT GAGCGACATT 
GGAATCATAT GGAACGTGTG GTAGATATGA CGAACTATCT GAACCCCGAG AGAACCTTGA 
ACGAACCTGG TCATTGCGTC TATCGTATGC ACGTGTACCC TACCGACCGC TTCTTTGCGA 
GCGTATCTAA CCTCCCCACG GTTTTCACTT CAGTGATCGC CGTGTCATTT GTTTTAATGG 
CAGTGACATT CTTCATGTAC GACCGCTTCG TTCGTCGCCG TAACGAGAAA GTCGTTGTGG 
CTGCAGCGCG CTCCAATGCC ATCGTATCTA GTCTGTTTCC GTCGAATGTA AGAGATCGTC 
TATTCGAAGA GCGTGACGAG GAGAAAAGAG CTTTTGCAAG AACACAACAT TCGGGCCGGT 
CGAAAAATGC GCTTCGAGGT TTTTTGGACG GCGAAGAAGC CGAGCTTGAC ACGGACGACG 
ACGGGGATAT GTACAAGACC AAACCAATTG CCGATCTATT TCCAAATACG ACGATTTTGT 
TTGCTGACAT CGCGGGCTTT ACGGCGTGGT CATCCGCCAG GGAGCCTACA CAAGTGTTCA 
TTCTTCTAGA GACATTGTAC CGCGCTTTCG ACGAGATTGC GAAGAAGCGC CGTGTATTCA 
AGGTTGAAAC GGTTGGCGAC TGCTACGTTG CCGTGACGGG TTTACCCGAT CCGAGAAAGG 
ACCACGCGGT GGCTATGTGT CGTTTCGCTC GAGATTGCAT GTACAAGATG CATTCGTTAA 
CCAGAAAGCT GGAAGTGACA CTTGGACCAG ACACAGCGGA CCTTTCCATG TAAGTGTTTG 
CTAATTCGAA ATGCAGCATG CAAATAATGA ATTGATCAGA GCCGTCGTGA TATGGAAACA 
AATGAGATAA CGATGCTTTC TCACTCGTGA TCTTTCTCTT TTATCCTCGA GTAGGCGCAT 
GGGTATACAC TCCGGCCCCG TAACTGCCGG TGTGCTTCGC GGAGAACGAT CTCGTTTTCA 
ACTATTCGGA GACACCATGA ATACCGCCTC GCGATTGGAG ACGACGGGGC GACGTGATCG 
CATTCATCTA TCAGAGGAGA CAGCGGAGCT ACTGACTATG GCGGGAAAGG CCAAGTGGAT 
CAAACCTCGT GAAGACAGAG TAGTTGCCAA AGGAAAAGGA GAGCTTTCAA CATTTTGGCT 
GGAATGTGGG GAAAAATCAA AACGAAGTTC ATCATCTGAA TCCGCCGACG AAACAGAATA 
TCCCGAAGAT ACTAGCGCAG CATCAGAAGT ATCTTCCGAT GTTGCTTTCA ACACAACCGG 
CGACGAAGAT TTTGCGTTGC GATCGATTTC GGCCAAGGTT TCTCGATTGA TTGACTGGAA 
TGTCGACGTT TTGTCCCGTC TATTGAAGCA AGTCTTGGCG AGGCGCATGG CCGAAGGTTC 
CATGGTAGTT GGCACATCAA TGCCGTTGAG AATACCATCC CGAGCCCCTG GAAAGACGAT 
CTTGGACGAA GTAGAGGACT ACATTATTCT CCCTCGGTTT GATCCCAAGG CAGCGAAACA 
TCAGATCGAC CCGGATTCCA TCGATCTGGA CCCAGACACA GAAGCACAGC TGTACGAATA 
CGTTTCTACG GTGGCTTCTC TATACCAAGA CAACCCGTTC CACAACTTTG AACATGCCTC 
GCACGTTACA ATGTCGGTCG TCAAGCTACT TTCACGTATC GTCGCACCGA TGGACCTGGA 
CTTTGACAAC AGCAAGGACG AGGCAGTAAA AACGAAAACG TTGCACGATC ATACGTACGG 
TATTACATCG GATCCGCTGA CGCAGTTTGC CTGCGTGTTC TCGGCTTTGA TTCACGATAT 
TGATCACAGC GGTGTTCCGA ACGTGCAACT GATCAAGGAG AATTCGCGAA TCGCCAAGTA 
CTACAAAGAG AAGAGCGTGG CCGAACAGAA CTCGGTCGAC TTGGCGTGGG AGCTGTTGAC 
GGAGGACAAC TACTCCAGAT TGGTGGCAAC AATCTGCCCG ACCGGGTCTG AGCTAAAACG 
TTTCCGCCAG CTGGTTGTCA ATTCGGTCAT GGCCACCGAC GTGATGGACA AGGATCTGAA 
GGAGATCCGC AACGGCCGCT GGGACCGTGC GTTTGCGGAA CCCCTGTCGT CGTTGTCCAA 
GAGTCCGAGA GAAAGCGTGA ATCGAAAGGC AACAATTGTG ATTGAGCATC TGATCCAGGC 
GTCGGATGTG GCTCACACCA TGCAGCACTG GCACATCTAT CGCAAATGGA ACGAGCGTCT 
GTTCCGTGAG ATGTATGTGG CGTACGAGTT GGGTCGCGCG GAAAAGAATC CGGCCGATTT 
TTGGTACGAG GGTGAGCTTG GCTTCTTGGA CTACTACATT ATTCCTCTAG CGAAGAAGCT 
GAAGGACTGC GGTGTATTTG GGGTATCCAG CGACGAGTAC TTGAACTACG CTGTGAAGAA 
TCGCAGCGAG TGGGAAACAC GGGGGCGGGA TATTGTGGTC GAAATGATCA CGGCCTTTCG 
GAAAAAGGAT GAAAAGCACA AGTCAATCAT GTGCCAGTAA ATCAGTTGTT TTGTTGTAGA 
TGATAACATA GAAGTATGTA GCGTGACGAT GGCTGTGCCT GTAAACCCAA GGTTTGGGCT 
GCTGACGTCG TTTGCCGTCC AGGCTATCGG CCGCAGCAAC GGCGTCGGCC ATTACCATTT 
CGTGAGCGAA TTAAAGCTTT CATGCCACTT GGCAGTGAGC GATCTTAGTA GCAAGCTAAC 
TAACAGTAAG TGTTGCAATT GATGAGTTGG TCCAGATTTG ATGGACGTCA TTGGACCGTT 
GGTCACACGT TATGTTGCTT TCCGTTAGTC GGATCGTTGC TCTTTTTGAA AAAGACTATA 
TAGAGACATC ATACGTTGGG AACGTCTTTT TATTCCCGTT GATTTCCATT CACGGCTACG 
AAAACCGATC GACGACGGTC CGATTCGGTA GGATTGTGCC GGAGCCAGTC AGTCATCGGT 
AATCCGTCCG ATGACCCCAC CCCCGACGGT GTGCGACGCG TTCCTATCTT TCGTTGGAAA 
CCCGGTTTCC CAACCAGTCA AACGAACATG TTCGCATGCA ATTTCACTGG TTCTGTTACG 
GCCCAGCCAG CCGTGCTGGC TGGCTGGCAC TCGGGACACC AAACCTCTTC GTACTAGTTC 
TAGCTACTGC TACAGAGCGA GGAACAAGCC AAATTTCCCG AACCACAGCA GTGCATACAA 
ACATATGTAC AAGCGCAGGT TGTTTCCCCC GTGTCACGCA ACACCACTGG CACAACAAAC 
AAAAAAGTAC ACACACACAC ACGCACCACA CACAAATACG CATAACCCCC CTCAACACTT 
ACGTATTTTT CGACAGTGCC CAGTGACCAT TCACTCGTCA CGGAACGATT CACTCTCCAG 
GAATCGACCG GTCTGGCACC GTATCTTTTT TGAGACGCTC TCCTAAATTC AGATTGCGAT 
CCTACGATTG TATCTCTTCC ACAGTGTCCC GAGGATGGAG ACAATGAACG GCGCCACGAG 
AGGACCCCCA TGTCCTAGCA AAATCCTGCT TCTCCCCAAA CCCTCGTCAA CGGTCGAGGC 
GAAATCGTTT ACCAACACTA AACAAAATCG GATCTCTTCC GCCAACTCGA GTCACAGCAG 
TGCCAGATTG CACTTGAACA ATCACAAGGT AGAGAAGCTA CATCAGGGCG CCTGCAAAGC 
AACGGGGGCG CATATTCGCG TCAAGCTACT GCCGGAACAC TTCCAACCAT CCGATAAGGA 
CGTTCTCTGT GGACGGGGTA GGGCGTGCAA AATGTGGAAG GGCAATCAGG ATTACCGCGA 
GCTAGTGGTT AGTAATCTAG AAGCCTACGC GTCGTCCACG AGCAAGCTCC ACAAGGGAAT 
GATACTCAGC AACATCGTAC AGCGCGTACG CATCAACAGT CCGGAAGGCG GTTTCGTCAA 
GAAGGATTCG GAAACGGGAC GCTGGTACGA AGTGGGGGAC TTTTTGGCAA GGGAGAAAAC 
GTCGCAGTAT TTTCGAGATG CCCTCCACGA GCAATACAGC AGCAGTGCCC AAGCCAAATA 
TAATCGCCGC AAAAAACGCC ACACGGATGG GAATTACCTG GAAACTCTCC CCCCGACGAG 
CAGTGTTTTC CCGCCCAGTG CAGCGAATCC AATCGACACC GCCATGCACG AGTCTTCCGA 
TGTTCCGTTG GTGGACACGA TCAAAACAGC AGTTTTGGAG AAACGTCAGG TACGTCGCAG 
ATCCGCTACT GAAGGAAACG CGTGAATTTC TGAATGACGA AACTAGAAAA TCAACCATCT 
TTCGACCGAT TGGAGCTTCA TCGGCTCCGT GAGAGACTTT CTTTCTCAAC ATGTTCCGAC 
AGAGAACCGC TTGTCCCCTT TCACGTAAAT GCAATATATC GTCTCTGAAC CGTTGTAATC 
TTTGTTTTTA CCCAGATTCC ACCCAAGAAA CGCAAAATTG AACGAAGACC TTCCGAAGAC 
GACGTGGCAT CTGTTCTCCA GAAAATGGCG TCCGTCAAAT CAACGGTAGT CCCGGATCAC 
GTACAAATCT GTCCCTTGCA AGTAGAGTTG CGCCGCCCCG ATGAATCGCC AATGAACGCC 
ACCCAACGAG TGGTCGAGCG CATGAGGACC GTCGCTCTAC AAACCAAGGT TGACCTCTTT 
ATCTTGCCCG AGCTATCGCC AGTAGGCTAC AGTGAAGACA CGTTTGCTAA ATACTTGCCC 
AATACACCAC AAAATCAGCA GTTGTACCAA AATATTGATG ATATCTTTGC CTACCAAGCA 
CGTCGACTGC AAGTATTTGT TTGCTACGGT ACAATCGGTT GGACTCCAAG AGAGGATGGC 
ACTCTCAAGC TCTCAATCCG ACAAGTTGTT TTAAATCGAT TGGGGCAACA GATCGCATCG 
TACGATAAAA TGTATCTTTG CGGTTATGGG GATTGTGCTG AAACGCGCTT TTTCGAGCCA 
GGGCCTAGAG AGCCCGTTTC GTTTGCGATC GACGGCTTTC GGTTCGGTTT GTTAATATGT 
GCCGACATAC GATACCCGGA ATTGTCGCGC CTCTTGGTGC GAGATCACAA AGTAGACGTA 
CTGTTGCAGC CGGCTGCTTT TCTCCGTGAT GTCTCCTTTC GAACGTGGAA GTCCTTTCGC 
GAAACGCGAG CGGTCGAGAA CTCGGTGTAC TTTGTTGGCG TCAATTACTC AGGAAATGAT 
TTCGGCGAAA CTTCCGTGAC CCCACCGTGG GTGGACGATT CGCACAAACC AGAAGTCTTG 
GGGACGGATG AGGGCTTTTT GGTGTGCAAA GTGCAGAAAA ACGAGTTGGA ACACGTGCGC 
CAGTCCATGC CGTTTTACCG GAATCTTTTT GACATATTCA AGACACTGCC GTGAAGTCAG 
GTTCATTTAT GCTGTAAGAT GCTCTCGAGA CTGGCTGTGA AAAGATACAG AAGTGTCTTT 
AGCTTTCAAA TTTTCTTTCC AAGATGACAA AATCGTGGGA GGATCTTTTG GCCCAAACGG 
GATCGAGCGT TCTTTGTCAG AGAGCATCGT GTTACTAGGG TTCAGTATTG ACAATAGAAT 
ACAGTTTAAG CAATATTTCA GTGTCACTTC TCTACTAGAG AGAGGTTGCT ATT 

 

Protein sequence

MMSDRAYSNG NRLPLPDDES TEGSHESSQL VVATKEDEER NEVKQVQLLA RRETNHYFSF 
AHTIEDASQF HITNMNLAFK NLGEIITTAA QATNASFPFV TVPKFEVYGR HARLQSGIET 
FTFNPFITDE TRAAWQAYSI QNQGWLKESR DIFLGGDEGN HQDYIDGPIT PIIWQRQADG 
SPIPTPGPDT YAPVWQTSPP IFNPATVNYN MFSEPFSKRM YQVILNLREA VLSETLDLTR 
LSGSAVAPED HEIMHDAFVS SIDTTTNVTG YKHPHSVLVQ PIFSELNNRS ATIVGLLQAV 
IPWDRYFTDL LPQGVSGIHA VLRNTCNESY TYEVKGNSAI FLGPGDLHER HWNHMERVVD 
MTNYLNPERT LNEPGHCVYR MHVYPTDRFF ASVSNLPTVF TSVIAVSFVL MAVTFFMYDR 
FVRRRNEKVV VAAARSNAIV SSLFPSNVRD RLFEERDEEK RAFARTQHSG RSKNALRGFL 
DGEEAELDTD DDGDMYKTKP IADLFPNTTI LFADIAGFTA WSSAREPTQV FILLETLYRA 
FDEIAKKRRV FKVETVGDCY VAVTGLPDPR KDHAVAMCRF ARDCMYKMHS LTRKLEVTLG 
PDTADLSMRM GIHSGPVTAG VLRGERSRFQ LFGDTMNTAS RLETTGRRDR IHLSEETAEL 
LTMAGKAKWI KPREDRVVAK GKGELSTFWL ECGEKSKRSS SSESADETEY PEDTSAASEV 
SSDVAFNTTG DEDFALRSIS AKVSRLIDWN VDVLSRLLKQ VLARRMAEGS MVVGTSMPLR 
IPSRAPGKTI LDEVEDYIIL PRFDPKAAKH QIDPDSIDLD PDTEAQLYEY VSTVASLYQD 
NPFHNFEHAS HVTMSVVKLL SRIVAPMDLD FDNSKDEAVK TKTLHDHTYG ITSDPLTQFA 
CVFSALIHDI DHSGVPNVQL IKENSRIAKY YKEKSVAEQN SVDLAWELLT EDNYSRLVAT 
ICPTGSELKR FRQLVVNSVM ATDVMDKDLK EIRNGRWDRA FAEPLSSLSK SPRESVNRKA 
TIVIEHLIQA SDVAHTMQHW HIYRKWNERL FREMYVAYEL GRAEKNPADF WYEGELGFLD 
YYIIPLAKKL KDCGVFGVSS DEYLNYAVKN RSEWETRGRD IVVEMITAFR KKDEKHNVTM 
AVPVNPRFGL LTSFAVQAIG RSNGVGHYHF VSELKLSCHL AVSDLSSKLT NMPSDHSLVT 
ERFTLQESTG LAPVPRMETM NGATRGPPCP SKILLLPKPS STVEAKSFTN TKQNRISSAN 
SSHSSARLHL NNHKVEKLHQ GACKATGAHI RVKLLPEHFQ PSDKDVLCGR GRACKMWKGN 
QDYRELVVSN LEAYASSTSK LHKGMILSNI VQRVRINSPE GGFVKKDSET GRWYEVGDFL 
AREKTSQYFR DALHEQYSSS AQAKYNRRKK RHTDGNYLET LPPTSSVFPP SAANPIDTAM 
HESSDVPLVD TIKTAVLEKR QIPPKKRKIE RRPSEDDVAS VLQKMASVKS TVVPDHVQIC 
PLQVELRRPD ESPMNATQRV VERMRTVALQ TKVDLFILPE LSPVGYSEDT FAKYLPNTPQ 
NQQLYQNIDD IFAYQARRLQ VFVCYGTIGW TPREDGTLKL SIRQVVLNRL GQQIASYDKM 
YLCGYGDCAE TRFFEPGPRE PVSFAIDGFR FGLLICADIR YPELSRLLVR DHKVDVLLQP 
AAFLRDVSFR TWKSFRETRA VENSVYFVGV NYSGNDFGET SVTPPWVDDS HKPEVLGTDE 
GFLVCKVQKN ELEHVRQSMP FYRNLFDIFK TLP