Gene PHATRDRAFT_48345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48345 
Symbol 
ID7203561 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand- 
Start bp174695 
End bp175361 
Gene Length667 bp 
Protein Length167 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182914 
Protein GI219125284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTACAACGAG AACCCTTTCC ATAACTTTGA GCATGCATCG CACGTAACAA TGAGCGTGAC 
AAAGTTGTTG AGTCGCATTG TTGCACCTAG TGATGTACTC GATGGACTCT CCAACAATGG 
CGGAAGCGGT CGTGGTCGAA ATCGGTTGGC CTCCAATCTG CATGATCACA CGTACGGTAT 
TACATCGGAT CCATTGACTC AGTTCGCTTG CGTCTTCTCG GCATTAATTC ACGATGTGGA 
TCACTCTGGT GTCCCAAACA CTACTCTTGT CAAGGAAAAT GCTAAAATTG CTGCCATCTA 
TCATAACAAG AGCGTGGCGG AACAAAACTC TATCGATTTA GCTTGGGATT TGCTAATTGA 
CGACAGCTAC GCGGAACTTC GCAATACAAT ATATGCCACT CAGGAAGAAC AACTACGATT 
TCGTCAGCTA GTCGTCAACT CGGTCATGGC TACGGATATT ATGGACAAGG ATCTCAAGGG 
ACTTCGTAAC GCGCGTTGGG AAAGAGCATT CGACGTCGTG TTCCGGGACG AGAATCCACG 
GGACGCGGTC AACCGAAAGG CAACAATCGT AATTGAACAC TTGATTCAGG CTTCGGATGT 
AGCGCATACG ATGCAGCACT GGCACATCTA TCGAAAGTGG AACGAACGCT TGTTTTGTGA 
AATGTAC
 
Protein sequence
MSVTKLLSRI VAPSDVLDGL SNNGGSGRGR NRLASNLHDH TYGITSDPLT QFACVFSALI 
HDNKSVAEQN SIDLAWDLLI DDSYAELRNT IYATQEEQLR FRQLVVNSVM ATDIMDKDLK 
GLRNARWENR KATIVIEHLI QASDVAHTMQ HWHIYRKWNE RLFCEMY