Gene PHATRDRAFT_48333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48333 
Symbol 
ID7203798 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp145523 
End bp146371 
Gene Length849 bp 
Protein Length133 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182907 
Protein GI219125270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATACC TAATGGAAAC AAGGATGATA GCCGAAACCA ACAGCTACGG GCTTTGGCAG 
CAGCGCTGCC CCGACGCGTT CGAAGAATAT GTTGACAATT TTGCAGGGAG TTCCCAGTGT
TGCGGCAGCG GCAATTGGGA GTTTGCTGTA TTTGCGACAA TAGAACAACA AGGCGTTATG
TACATGCAAT GTTAAACAGG AAAATACCGG TATGTAAAGA TTCTATATGT TCCCAACCGT
GTCACCATTA GTCTCACCGG TGGACTCCTC GCCATTGTCA AGGCGATGCA CCGCTTCTCC
GACGACGCAC TCGTACAAGC TGCCGGCGGG AGAGCACTCC AGAATCTGGC ACTGGATCAG
AACAACAAGG GCGGCATCGC TAGCGCCGGA GGTATTCAAG TCCTCGTGGC CGCCATGGAA
CAATTCCCCG ACGACTCCGC CGTGCAAATG GGCGGCTGTG GGACTTTTCA GAATCTCGTA
TGGGGCAACG ACGAAAACGG AACCCGCATT GTACAAGCCA AAGGGAGTTG ACTGTATTCC
CAAAGCCAGT ACCAACATCT TTGTGGCCTA TATTGCCAGT AGCCTTTTTC TATTCACGGT
GCAACCGTCC GTTGCTTGAT TTTTTGCAAT CAGTGCTGCA AAAGGAAAAC CAAAGGAGGT
AGCCGCTCCC GTCCGTCGCT TGATGTTTCG CAATCAGTGT TGCACAAGGA AAACCAAAGG
AGGTAGCCGC TTCCGTCTGT TGCTTCCTGA GGCTGAGAAC AATACCTTGG TAAGCACATT
GTGTTCCAAT TCTAATTTTT GTAAACCTGT ACCACTAGAT GCACAACACA ATAAGAACTC
CAAAGTATT
 
Protein sequence
MAYLMETRMI AETNSYGLWQ QRCPDAFEEY VDNFAGSSQC CGSGNWEFAV FATIEQQGVM 
YMQSAGGRAL QNLALDQNNK GGIASAGGIQ VLVAAMEQFP DDSAVQMGGC GTFQNLVWGN
DENGTRIVQA KGS