Gene PHATRDRAFT_38931 details

Gene Information

• Locus tag: PHATRDRAFT_38931
• ID: 7203696
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: +
• Start bp: 579206
• End bp: 582580
• Gene Length: 3375 bp
• Protein Length: 1031 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002182864
• Protein GI: 219125179

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAAGTT GGGAAATCGA GTCCGTGCAG GATTGTCTGT GCCGGACAAA TCGTTCCTTC 
GGTGGTCGTA GGGACCATAA AGAGCGACCT TCTTTTCTCA CGATTGGCTC ATACTGCTTT 
AGCCCAATAT TCGTCGAACC TTTCCGGGGG ACGACAAAGA CAGTAGCGAA GAAGACGACT 
CGTCTCCACA AGTGTTCCAC CGTAATGGTG GGGGCAAGCA GTTAGTCCGA CCCGGCGGCA 
AGTATCTCCG ACCGCGGCAC GACGACGAAG ACGATGATGA AGAATCTTCC TCAGAGGAGG 
AAGAAGACCC CCCGCAACAG CAGATTTTTA GTCGAGCCGG TGGTGGCAAG CAGCTGCGCC 
CGTCGGGAGG AGGCGGAAAA TATTTGCGTC CATCGTAAGT AAGCCCCCGG TCCCGCGTTT 
TGATCAAATA ACTGTATCTA CCTAGTTTTC TGTCTGTCTA ATTCTGTGAT TGTTTACAAC 
AGTGGAGGTC AGGAAGACGA CGACGATGAG AGTGAAGATG ACGATGAAGA GCTGGACGAC 
GACGAAGACG ACGAGGAAGA CCAGACTGCT CCACAATCCC AGACCGTACG CGTAATGCCG 
CGTGGAGGGG GCAAAAACTT TATTCGAATG CACGCCCAGC AACAGCAAGC GGAAGACAGC 
GAAAGCGAGA GCGAAGACGA CGAGGATGTG GTGGTGGTGG AAGAAGAAAC GCCAGCTTCT 
GCGCCGGCCC CGGTTGTAGT GCCGGCGGTT CCGCAAGCCC GAGGCAAAAT GCTGTCCAGC 
ATGAGACCTC CGCCACAAGA AGACGACGAT GACTCGGAAG AAGACGATGA CGAAGTAGAA 
GTTCTGGAAA ATGTCCAACC AATTAAGCCG GTGCAGCGTG GCGGAGGGAA AGCAATTTAT 
GGTGGAGCGG GTGGGGGAAA GCAGCTTCGC CAACCAGAAC CCGAACACGA GGAAGAAAAG 
CCCAAGCCAA CAACCATTTC GCGATCTCCC GCCGGTGGCA AGCAATTACG TCGCCCTGAA 
GCTGAGAAAG AAGAGGAAAC GCCGAAGCCA ACAAATATTT CTCGATCCCC GGCAGGTGGA 
AAACAACTAC GTCGGGCGGA ATCAGAAGAG GATATTCCAA AGGTTGCTGC AATCATACGT 
TCACCCGAAG GGGGAAAGCA ACTTCGAAGG CCTGAACCCG AACAGGAGAA AAAGGAGCCG 
TCTGAGGCAT CGAAAATTTC CCGCTCGCCG GCTGGGGGTA AACAGCTCCG ACGTCCTATT 
CCGAAGGAAG ACACTGAAGA CGACGACGAT GAAGATGATG AAATCTTTGG CGACGATGAC 
GATGATGAGG AGTCAGACTA CGAAGAAGCA GTCGCGGCGA AAAGATCGAC TGCAAACGGT 
CGACCCAAAC GCAGAACTGC GGCAAAGAAG GTCATTGTTG AGGAAGACGA GGAAATCTTT 
GGTGACGACG ATGTCAGTAG CGACGAAGAA CGGGAACTCG ACATTAATAA TACCGAAGCT 
TTGATCCGCG ACGAAGACGA TCGCAAATAT CTAGATACCC TGCCAGAGCT CGAACGTGAA 
GCAATATTGG GCGAGCGTTT TGAAAAACTC AAGAACGAAC AGGATTTGAA AAAAGCCATT 
AAAGAGGCCA AGTAAGTAAA TTGTGGTGCT TTCAACGGCA CGGTGCATTG ACCTCCGCTC 
ATTTTTGGGT TCTTTATTAA CAGACGCCAG GCAGACGAGA AATCGGGAAA TGTTCAATCT 
ACAGCACAGC GTAAGGCAAC CCCGGGCAAG AAATCTGCCA AAAAAGGTAC GGCAGATGAC 
GACCAAGCCC TCGCGAGAAA ACTCGCTGGA GCCAGTCGGC GAGAATCTAC TCGTGACAAG 
GATGCGAAAG GAGCGAAGAG CAAAAAGGCC GCGGCTCTAG CGGCCTTGAA GAAAGAGCGC 
AAAATACAGA AGCAGCAAGA TTCCGATGAC AGTGAAATGG ACTTCGGCGA CGATTCCGAT 
GATGATTCCG ATGAAGATTA TGATGATGGG GGCTTTATGC CGTGGCAAAA GAAGGCCAAA 
ACACCGAAAT CGACAGTTTC ACGTCTCGAC AAAGATGACG AGAAAATGGA TTCCGAAGAT 
GACCGCGACG GCGCCGACGT ATCCAGGAGT AAGACGACTT CGGATCGGAG TGGAGGTTCG 
GCGGTTGAAG CCACTTTGGA GGACTTCAAA AAAGTAACAG TTCCTCGCCG GCGCCTTGCA 
CGGTGGTGCA ATGAACCTTT CTTCGAAGCA GCTATTTTGA ATTGCTTCGT ACGGGTGCTT 
ATCGGAGAAG ACGAGAATGG CGACAAGGTC TATCGCTTGT GTGAAATCAC GGATGTCAAA 
ACAGGGATGA AAGTGTATAA GTTTCCGATC GCTAAGAAAG GTGACAAGCC CATCATGACT 
ACGAAGACTC TGACTCTGAA ATTTGGGAAA AACGAGAAAG AGTTTCCTAT GTCGTTGGTC 
TCTGATGCGC CGCCGGACGA AGTGGACATG AAGAAGTACG TGACTGTGAT GAGAAACAAT 
CGCCAAGAGC CTTTAACGAA GCGACAAGGA AACAAACTTC ATCGTCTCCA GCACGACTTG 
GTTCACAACT ACGTATATAC TACTGAAGAC ATTGAGCGCA ATCTTCAACA ACGAAAGAAA 
CAAGGAAAAA AGCTGGGAAA TTTTGGAGCG GAGCTGACCA AGGCTGCGAT CGCAGTTCAA 
GCTGGCAAAG ATTTTGTCAA TGAAGCAGAG AAAAAATTGA ACGATGCCAA GCGAAGCTTG 
ATGGAATCTG ACAGTAATGA TGCGTCTTTT GAGAAGAGCG TGAAGGATGC TGAACAGACT 
CTTGAGCGTG CAAAGGCGAA CCTGGAGGAG ATTATACAAG ATGAAAGAAA GATGCTTGAT 
GTCGTGGATA ATCGTAAGCG ATTGCTAAAC CAACGAGCGA AAGATCGAAA TTGGGCCAAA 
GTTAACCTGC GTGCCGTCCA AGCAAATCAA AAAGCAGACC GGGAGGCTAA CAAGCCACTT 
GACAGTGCAC TATCGGGTTC CGCCAAAAAA GATACGTTCA ACCCGTATGC TCGCCGTCGA 
GTGAAACCGA AGATTCTCTG GGAGGTAGGG CAAGATGACG ACACGGAAGA AGCGAAAGTA 
GGGGAAGTCG GGGGAAGCGA AGACGCTCCG AAAGAATACT CGAACATTCC GCCACCTAAT 
CTCGTTCAAG AAACCGACGA CAACACCGCT GCCCTTAGCG AGAGCCATCA GTTTGCTATA 
GATGAAGAAG GGCTTGCTCA GGCATCGGCT ACATCTATTC TGTTCGGATC AAATAGTTCA 
ATGAAGCGAA AACGCAACCG AAGAGGTCTA AGCCTTTCGG ATTACATGGA GCAAAAAGCA 
AGCGGGCGTT TATAG 

 

Protein sequence

MPNIRRTFPG DDKDSSEEDD SSPQVFHRNG GGKQLVRPGG KYLRPRHDDE DDDEESSSEE 
EEDPPQQQIF SRAGGGKQLR PSGGGGKYLR PSGGQEDDDD ESEDDDEELD DDEDDEEDQT 
APQSQTVRVM PRGGGKNFIR MHAQQQQAED SESESEDDED VVVVEEETPA SAPAPVVVPA 
VPQARGKMLS SMRPPPQEDD DDSEEDDDEV EVLENVQPIK PVQRGGGKAI YGGAGGGKQL 
RQPEPEHEEE KPKPTTISRS PAGGKQLRRP EAEKEEETPK PTNISRSPAG GKQLRRAESE 
EDIPKVAAII RSPEGGKQLR RPEPEQEKKE PSEASKISRS PAGGKQLRRP IPKEDTEDDD 
DEDDEIFGDD DDDEESDYEE AVAAKRSTAN GRPKRRTAAK KVIVEEDEEI FGDDDVSSDE 
ERELDINNTE ALIRDEDDRK YLDTLPELER EAILGERFEK LKNEQDLKKA IKEAKRQADE 
KSGNVQSTAQ RKATPGKKSA KKGTADDDQA LARKLAGASR RESTRDKDAK GAKSKKAAAL 
AALKKERKIQ KQQDSDDSEM DFGDDSDDDS DEDYDDGGFM PWQKKAKTPK STVSRLDKDD 
EKMDSEDDRD GADVSRSKTT SDRSGGSAVE ATLEDFKKVT VPRRRLARWC NEPFFEAAIL 
NCFVRVLIGE DENGDKVYRL CEITDVKTGM KVYKFPIAKK GDKPIMTTKT LTLKFGKNEK 
EFPMSLVSDA PPDEVDMKKY VTVMRNNRQE PLTKRQGNKL HRLQHDLVHN YVYTTEDIER 
NLQQRKKQGK KLGNFGAELT KAAIAVQAGK DFVNEAEKKL NDAKRSLMES DSNDASFEKS 
VKDAEQTLER AKANLEEIIQ DERKMLDVVD NRKRLLNQRA KDRNWAKVNL RAVQANQKAD 
REANKPLDSA LSGSAKKDTF NPYARRRVKP KILWEVGQDD DTEEAKVGEV GGSEDAPKEY 
SNIPPPNLVQ ETDDNTAALS ESHQFAIDEE GLAQASATSI LFGSNSSMKR KRNRRGLSLS 
DYMEQKASGR L