Gene PHATRDRAFT_38865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38865 
Symbol 
ID7203600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp399226 
End bp400410 
Gene Length1185 bp 
Protein Length394 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182827 
Protein GI219125102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCCTG CCTGTGAATA TGCCCCTCCA AAGACTCTCA AGGGTGCTCC TGTGCCAAAG 
TATGAGGCAG TCAGTCCAGC AAGAGACCTC GAACACTCAA CTTGTCACCT TTCACAAATC
CTTCAAGTTG AATCAAAGTC ATATCTTCCT GTGGAAAACT ATGTTGCTCA CTTGTCTGAA
AAGTTTTTCG ATTTTTGGCA AGTGCGCTTC GATTTTGCGC ATTGGTACTA CGACATTGCC
AAGGATTTCC AATACGAAGG CGAAATCGTC ATTATTGCAC TGAGCTACTT CGACCGGTAC
ATGGCGCTGA CCACAAAGGA AGATCAATAC ACTCCCATGG AAAATGAGCT GCAAGTGCTT
GCTTTGACTT GCCTATTTGT AGCAATCAAA ACCTTTTGTG ACGCAACAGA CGAGACAGAG
TGTCTCGCAT CGATTGCCGC CATCGGGCGG TTCCAAATGG AGGAAATTGA AAAAGCAGAA
CTGTCCATTT TGAATATGCT GGAGTGGAGA ATAAATGTTC CTTCGACTTT TCGGTTCATT
GAGACGTTCG TTCGCTTATT TCCCGAATGG AATGATCAGT CAACCAAGTT TGCATCTCGA
GAACTTGTCC GCGGTTCCAT CTACAACAGT AGCTGCATAT TTGCCACAGT TTTGGCTATG
GATGGGACTT TGGTTTTCAA TTATCGGTCG TCGGAACTTG CTTTCGCTTC CATCGTCTGC
GCTATGTATG CGCTGGAACG TCACATTCGT ATGCGGAGCG ATGCCAAATT CTATTTCCTA
GAATTGCTCC GAGAACTTAC GGGATGGACT CCTACCAGCG ACTTTGTGGG GGATGCTTAC
GACACGTTGG TGACATTGTT ACCGTCCATG GTTGGTGGCG AATGCAAGCT CGACCCCTTT
TTGATCCAGC CCATGCCAGA CGACTACTTT CATGATGACT ACGACTTTAA TGCGATCATC
TATCGAGCCG AGGACATTCG GACTGTCGAT ACAACGGTTC CAAAGCTGCT AATGCTAGAC
AGTGAGGGCG AGCAGAAAAA CGAGCCGTCT ACGGATGTCG AGGCTGGAGA AATATGGTAT
GAAACAATCC ATAGAACAAA TTCGAGAAGC AGGAAGAACA CCCAACTATC AAGATTATGG
TCGGCTCTCT TTCGCCGAAA GATTCGAAGC CGCCTACCGC AGTAA
 
Protein sequence
MPPACEYAPP KTLKGAPVPK YEAVSPARDL EHSTCHLSQI LQVESKSYLP VENYVAHLSE 
KFFDFWQVRF DFAHWYYDIA KDFQYEGEIV IIALSYFDRY MALTTKEDQY TPMENELQVL
ALTCLFVAIK TFCDATDETE CLASIAAIGR FQMEEIEKAE LSILNMLEWR INVPSTFRFI
ETFVRLFPEW NDQSTKFASR ELVRGSIYNS SCIFATVLAM DGTLVFNYRS SELAFASIVC
AMYALERHIR MRSDAKFYFL ELLRELTGWT PTSDFVGDAY DTLVTLLPSM VGGECKLDPF
LIQPMPDDYF HDDYDFNAII YRAEDIRTVD TTVPKLLMLD SEGEQKNEPS TDVEAGEIWY
ETIHRTNSRS RKNTQLSRLW SALFRRKIRS RLPQ