Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38865 |
Symbol | |
ID | 7203600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 399226 |
End bp | 400410 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182827 |
Protein GI | 219125102 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCCTG CCTGTGAATA TGCCCCTCCA AAGACTCTCA AGGGTGCTCC TGTGCCAAAG TATGAGGCAG TCAGTCCAGC AAGAGACCTC GAACACTCAA CTTGTCACCT TTCACAAATC CTTCAAGTTG AATCAAAGTC ATATCTTCCT GTGGAAAACT ATGTTGCTCA CTTGTCTGAA AAGTTTTTCG ATTTTTGGCA AGTGCGCTTC GATTTTGCGC ATTGGTACTA CGACATTGCC AAGGATTTCC AATACGAAGG CGAAATCGTC ATTATTGCAC TGAGCTACTT CGACCGGTAC ATGGCGCTGA CCACAAAGGA AGATCAATAC ACTCCCATGG AAAATGAGCT GCAAGTGCTT GCTTTGACTT GCCTATTTGT AGCAATCAAA ACCTTTTGTG ACGCAACAGA CGAGACAGAG TGTCTCGCAT CGATTGCCGC CATCGGGCGG TTCCAAATGG AGGAAATTGA AAAAGCAGAA CTGTCCATTT TGAATATGCT GGAGTGGAGA ATAAATGTTC CTTCGACTTT TCGGTTCATT GAGACGTTCG TTCGCTTATT TCCCGAATGG AATGATCAGT CAACCAAGTT TGCATCTCGA GAACTTGTCC GCGGTTCCAT CTACAACAGT AGCTGCATAT TTGCCACAGT TTTGGCTATG GATGGGACTT TGGTTTTCAA TTATCGGTCG TCGGAACTTG CTTTCGCTTC CATCGTCTGC GCTATGTATG CGCTGGAACG TCACATTCGT ATGCGGAGCG ATGCCAAATT CTATTTCCTA GAATTGCTCC GAGAACTTAC GGGATGGACT CCTACCAGCG ACTTTGTGGG GGATGCTTAC GACACGTTGG TGACATTGTT ACCGTCCATG GTTGGTGGCG AATGCAAGCT CGACCCCTTT TTGATCCAGC CCATGCCAGA CGACTACTTT CATGATGACT ACGACTTTAA TGCGATCATC TATCGAGCCG AGGACATTCG GACTGTCGAT ACAACGGTTC CAAAGCTGCT AATGCTAGAC AGTGAGGGCG AGCAGAAAAA CGAGCCGTCT ACGGATGTCG AGGCTGGAGA AATATGGTAT GAAACAATCC ATAGAACAAA TTCGAGAAGC AGGAAGAACA CCCAACTATC AAGATTATGG TCGGCTCTCT TTCGCCGAAA GATTCGAAGC CGCCTACCGC AGTAA
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Protein sequence | MPPACEYAPP KTLKGAPVPK YEAVSPARDL EHSTCHLSQI LQVESKSYLP VENYVAHLSE KFFDFWQVRF DFAHWYYDIA KDFQYEGEIV IIALSYFDRY MALTTKEDQY TPMENELQVL ALTCLFVAIK TFCDATDETE CLASIAAIGR FQMEEIEKAE LSILNMLEWR INVPSTFRFI ETFVRLFPEW NDQSTKFASR ELVRGSIYNS SCIFATVLAM DGTLVFNYRS SELAFASIVC AMYALERHIR MRSDAKFYFL ELLRELTGWT PTSDFVGDAY DTLVTLLPSM VGGECKLDPF LIQPMPDDYF HDDYDFNAII YRAEDIRTVD TTVPKLLMLD SEGEQKNEPS TDVEAGEIWY ETIHRTNSRS RKNTQLSRLW SALFRRKIRS RLPQ
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