Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38787 |
Symbol | |
ID | 7203810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 207300 |
End bp | 208556 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182792 |
Protein GI | 219125030 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTGC GTTCGACCAC TTTTAAGGTC GGTACTTTGT CGCTGCTTCT CATAGTCGCA ATCCAAAGCT CCACTCGACG ACTGGAAAAA CAAACTAAAA ATATTCAGCA AGGTCCTTGT GACGATGTAC GTCATACTTC GGGTCGCCGT TTGACGACGG CGACTGAAGA GGAAGCTCTC CGGCTCGCCA ACTATCTCCC GAATTTTCAT TTTTCAGAAC ACGTGCAAGT GTTGGGACCA ACGGTTTTCC CCAAGCCCAG CGACGTTGCC GAACAAGCAA GCGATGATGT TATTGTCCCG GCGCTCCAGC CCGTCATCGG ACAGCATCGA CCGGATCAAG ACGCTGTCTT CGCCTTTGCG GCGGAATATC CGATAAAGAA TTACGTGCTG TTTGTACAGT CGCTCCGCAA AACAGGATTT ACGGGAGACA TTGTTTTGTC CGTGCACGAG ATTGACTTAC GAAATGCCGA GATTCGAGCT TTTCTGTCCT CCGATCCGGG CGTTGTCGTT TACGCTCCAA GTACCGTTTG CTACAACGCC GAATTGGAAA CTGTTGAATC TGTAAAGGGA GGTATGCGCA CATGCCAAAC ACATAAACTG TGGGGGAAAC GCCATACGGA TGGCACCGTC ACGCCATTGC CTGATCCGCG TTCGCAACGT ACGGTTGCTA ATACGAGATA CGAAATATAC TGGATCATGG CATTGCAATA CGCTCCGCAG AGCTGGATTT TGATAGTCGA CGCCCGGGAC ACGGTTTTTC AATCGAATCC GTTTGCTGAC GTTCCTCGCC AAACTGATCC TACCGCCAAA TCTGGAGTTT TGTACTTTTT TGGAGAAAAC ATGGATGCCA CCCGTTTGGG CAAATCCAAA CAAAATTCCA AGTGGCTACA GAACGCCTAT GGTGATGTAA TAGGAGAGCA CTTGAAAGAC AAACCGACAA TATGTTCGGG CGCTTCCATG GGTGAACAAA TAGCATTGGA AGCCTACATT CGTGCCATGG TGGCTGAGGG AGACGAAACT GGAACTGTCC TGATGGGTTC CGACCAAGGC TTTCACAATC GCCTATTCTA CAGTCATAAG CTGGCTAACG CTAGACATAT CCACGACATT GTGGTCTTTG ATCAAGGCAC GGGAATCGTA AACAATATGG GAGCTTTGCG GACAAAATCG CTGACAGAGT GGGGGAATGG TAAAATCTTG AAAGAGGGCG CAAAAGGGGA ATATTCAGTT CTCAATTGGG ACGGAACAAA GAGGTAG
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Protein sequence | MSLRSTTFKV GTLSLLLIVA IQSSTRRLEK QTKNIQQGPC DDVRHTSGRR LTTATEEEAL RLANYLPNFH FSEHVQVLGP TVFPKPSDVA EQASDDVIVP ALQPVIGQHR PDQDAVFAFA AEYPIKNYVL FVQSLRKTGF TGDIVLSVHE IDLRNAEIRA FLSSDPGVVV YAPSTVCYNA ELETVESVKG GMRTCQTHKL WGKRHTDGTV TPLPDPRSQR TVANTRYEIY WIMALQYAPQ SWILIVDARD TVFQSNPFAD VPRQTDPTAK SGVLYFFGEN MDATRLGKSK QNSKWLQNAY GDVIGEHLKD KPTICSGASM GEQIALEAYI RAMVAEGDET GTVLMGSDQG FHNRLFYSHK LANARHIHDI VVFDQGTGIV NNMGALRTKS LTEWGNGKIL KEGAKGEYSV LNWDGTKR
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