Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38713 |
Symbol | |
ID | 7203723 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 36062 |
End bp | 37835 |
Gene Length | 1774 bp |
Protein Length | 565 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182756 |
Protein GI | 219124954 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCTC GCAACGTCGT TCGCGAGATC AAATACGCCA CTATCGGTGC GTCCATATCC AGCCCTCGGG TGTTGGACGT CGACCGCGAT AAATTACGGC GAATTCTCGG ACATGTGCCG ATGGAAGTAG TTGAGCGTAC TCTTACCGCC ACTACACAAC TAGCGGAGCG CACGGGCGAA ATGCCTTTGC ATCGTCGTTA TAAAACCAAG TTTGAACAAC TTCGGTATCG ACGTTTGAAA TGCACACTTT ATAGTGATAC TTTTAAATCC TCTATAAAAT CCTCGCGTGG ACATACCCAT ACTCAGGGTT TTGTCTGTGG TGACTCTTAC TTTATCTATC ATTACCTAAT GAAAGCAGAG TCCGCGGCAG ACCAGGGTCT CGCCGAATTC ATCCACAACA TCGGTATTCC TGCACAATTG CACACCGATA ACGCGAAAGT GGAAACACTT AGCGAATGGA AAAAATTTAC TTCCAGTCAC TGGATAAAGA CGACGGTCAC TGAACCCTAC TCTCCGTGGC AAAATCGTTG CGAACACGAA TTTGGTGCTG CGCGCATTCA CACGCGCCTC GTTCTCGAAA CCACCAAGTG TCCCGAACAA TTATGGGACT ACGCCCTTGC CTACGTCATT TTCGTACGTA ACCACACGGC ACGAAAAGCG CTGGCCTGGA TCACGCCTAT TACTGCGATG ACTGGCGACA CCCATGATAT TTCTGAAATC CTGGTTTTCG AATTTTTCGA ACCAGTTCAG TATTTTGACA ATCCATGTCA AATTTCCACT AAATAAAGCC AAAGTCGGCC GTTGGTTAGG TATTGTAACC AATGTGGGCC AAGCCTTGTG CTACCATATT TTGACGGACA AGGGTACTGT AATCACTCGA TCTACTGTTA CACCCCTCCA AAACCTCGAT TCGTCTGCTC TGCAGACTGC CCTCGCTACT TTTGACGCCG CCATAAGGGA GACTTATCAG CCTTCTGATT TCGCCCTCGG CAACAAAATC AAAGCGCCGG CTTTCCGCCG TGACAAAGCG ATGAAAGTCG CTTGGCGATC CGACGATCCC GGCGATGGCA ACACCCGTAA CAGACATGTG TTATACGATC TGAACGAAGG GGATGACCAT ATTCAACTGG ATCCCGGGCT CACGGTTGAC GATTTCTTCG AGAACGACTC ACCGGATCAG GACCCCACCT CCTTAATATT GGTACTGACG TTCTACTCAC TTCGGGTGTG GTTCAGCGCC AGGGCCGAGT TATCAAGCGC AATCGCGACG GTACTCCAGT CCCTAACGAC GACCCTGGAA ATTTCGTTGT CGAATTCGAC GACGGTACCG AGGAAGTCCA CGGTTACCAA GCTCTCCTTG ATGCTGTTTA TAAGCAGGTC GATGATGACG GAAATGAATG GTACACCTTT GATGATATTG TCGACCATCA AGGGACGTAC GCGTGGATGG TTTCTACGCG TAAAATAGGC CAACGGTGAA TTTACCTGGG AGCCCCTCAC CTCTTTGAAG GAGAGCAATC CCTACCCGGT GGCCAAATAT GCGGCCGACC ACAATCTCTT ATCCGAACAT GCCTTTTCTT ATTGGGCTCC CACCGTGCTG AAAAAGGCCG ATCGATGGAT CCGTGCTGCC AAGACGCGAA AAAAGAAAAA TCGATACAAA TACGGAATAG AAGTCCCTCG CAACGTACCC AACGCTTACG AATTGGAAGC AGAAACGGCA ACCACCTCTG GCGCGATGCA ATTCGCAAAG AAATGGATAC ACTTGAGAGC ATGA
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Protein sequence | MNPRNVVREI KYATIGASIS SPRVLDVDRD KLRRILGHVP MEVVERTLTA TTQLAERTGE MPLHRRYKTK FEQLRYRRLK CTLYSDTFKS SIKSSRGHTH TQGFVCGDSY FIYHYLMKAE SAADQGLAEF IHNIGIPAQL HTDNAKVETL SEWKKFTSSH WIKTTVTEPY SPWQNRCEHE FGAARIHTRL VLETTKCPEQ LWDYALAYVI FVRNHTARKA LAWITPITAM TGDTHDISEI LVFEFFEPVQ YFDNPSKVGR WLGIVTNVGQ ALCYHILTDK GTVITRSTVT PLQNLDSSAL QTALATFDAA IRETYQPSDF ALGNKIKAPA FRRDKAMKVA WRSDDPGDGN TRNRHVLYDL NEGDDHIQLD PGLTVDDFFE NDSPDQDPTS LILRQGRVIK RNRDGTPVPN DDPGNFVVEF DDGTEEVHGY QALLDAVYKQ VDDDGNEWYT FDDIVDHQGT YAWMANGEFT WEPLTSLKES NPYPVAKYAA DHNLLSEHAF SYWAPTVLKK ADRWIRAAKT RKKKNRYKYG IEVPRNVPNA YELEAETATT SGAMQFAKKW IHLRA
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