| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_38712 |
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| Symbol | |
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| ID | 7203776 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011685 |
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| Strand | + |
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| Start bp | 25786 |
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| End bp | 33209 |
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| Gene Length | 7424 bp |
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| Protein Length | 1998 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182755 |
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| Protein GI | 219124952 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTGTC CGAGGAAGGT CACTCCCGCT GTTCCGGCCC CTGCCGCAGC GACGGACTCA
CCGGCTGATG CCGCGTCCGC ATCCGAAGAG GAAGAGGAGT TCGGAGGATT CGACTCCTCC
GACGGTCAGG AGCCTTCGGG CACCGCACCG TCATTGCCGG CATCTTCGGA TGATGAAGGT
ATGGCAAAAA GACTGCAAAG CCTTTGGCTC GCAGCAAGAA CACGTCTGAC GAAGTCAGCG
TGATTGAGAA AAGCGTCATC AACGCAGAGC CTCACTTGTC TAAAGACAGT GACGGTCTCA
ACTCCGTTCC TCGGCAAGAC CGTGTTGAAC AAAAGGCCTT GATGGTTGTC CTCCGTGACG
TCATCGCGGC TGCAATGTTG GTTCCGTTCC TCGGCAAGAC CGTGTTGAAC GAAAGGCCTT
GATGGTTGTC CTCCGTGACG TCATCTGTGT CCATTGTCAG TTGCGGCTGC AATGTTCAAC
AACGGCATTA AATCATCTGA TGATTTCCGT CTTCTCACGA AGGAGGACAT CAATGATCTC
TGCATGCGGC TCAAAATGGG CTCCATGCAT ACCAAGCGAA TACTCGTCTT CGCAAAATGG
ATGCATCACG CACCCAACTC AGTCGATGTC GCCAAAGAGT TCACGGCTTC CGTGCTACGC
TTTGAGATGA TGACTAGAGC CGCGGCGTCG TATGATAATG TGACTACGAC GGCTGCAAAG
GCTGAAAAAT CGGCTACTAG CCTCTTGCCT GAACCGTTTG ATGGTTCGCA GAAAAAGTGG
CTCACTTTTC GTTACGGTTT CGAAGCGTGG GCAGGCGCAA GTGGGTCCAC TTTTACCGCG
TGCATCGCGC ACCATTCGGA TCGGTATTCG AAAGCCGACC CAACCGGACC CCATACGTCG
CCCCGTGACG TTTCAGATTT GTTTGCACTC TCCCCAGTTG TCAACATCAC CAGGAACGCA
ACAATCTTCT ATACTCTCAT GTCGCTAACC AGCGCTGGGG ACGCCTGGGG ACTTGTTGAG
CCCCACGAGC ATACTAAGGA CGGACGCAGT GCCTGGATTT CTCTATGTGC CTTCTATGAA
GGAACGAGCC AAGTGGGTCT CACTACCGAG CAGGCTCGCG CGATAGTCAT GGAGTCGGTG
TATATAGGAC TGTCCAAACA GTTTTCCTTC ACCAAATATG TCGCTCGGCA TATCTCTGCC
AACAATGCCC TTTTGCGTAA CAAGGAGGGC TATTCGGACG CTCAGAAAAC GAATTTCTTT
CTTAAAGGGA TTACTGATCC GGCACTCCTT CCTTATAAGG CAACTGCCGA AGCGCGACTC
GATGACGGGA ATTTTAATCG GGTCGTCAAC TACATGCGTA CGTCCGCGAC GAAACTCAGT
TCCAAGGACA GAAGCGACTC ACGGAACGTA CGTCAGACAA AGACCAATGG CAGAGCCACC
GGCAACCAAC GTGGTAACGA CAAGAAACGG CGTGGCTCGT CCAACCGTCC GTCGAACAAG
GGGGCTGAGA GACCTTCTCG CCCTCATAAA CACACGTCTT ACCTCCTGAG CAGTGGGAAG
CCCTAACCCC AGCTATCAGG GAGAGTATCT TGAGCGCAAA ACGCAGTATT CCACCCCCTG
GCCGTGAGGC CAAAAGGGCT AAATCCTCAG ATACAGATAA CTCTAGTTCA ACCGTTGAAT
CTTATTCACA ACCGCCTAGT AGTAAAAAAC CTATTCGTAA ACATACATGC GAAACTCACG
TCCAAGTAGA TTCCAGTACC CCTGAAACCC TACTTCGTGA CGCACCCACA GACATTTCAC
CCCACGTCAC CACCAAAAAA GTGACATTTG GTGCAGGTGT CCTCTTTGGT CGGTACGCTA
ATCGCGTATC GTTGAATCGT ATGGTCCGCT CCGGCAGTCA TTTCGATCAA GCCCCTTGGC
GCAAGTCGGA TTTCCGACTT AACGATGCGA CACTAGTTCG TATTCGTCAG AACCGCTCAC
GCGGAACAAA AACTCCCACC AATTATGGTG AAGCGGTAAT TGATACTGGT GCAGACACCG
TCTGCGTCGG TGCCGGGTAC TCTGTATTGT CATACACGGG TCGATCAGTC AGCCTTCGCG
GTTTTCATGA TGACGGTGAA ACGTTTGACT GTGAACGGAT TCCGGTTGTC ACGGCGGCAA
CCGCCTATGA TTATGACGAC GGAACAACCG TGATTCTCAT CTTTCATGAG GCACTGAACC
TCGGACCAAC ACAGACCACC TCGCTCATTA ATTTGAATCA AATCCGACAT GCCGGACATC
AAACCGATGA CATTCCAAAA TTCTTGTCGC AAGGCAAATC CCTTCACGGC ATCGAAACTC
TCGACGGTGA TTATATCCCG TTTGAGCTCA AAGGTCATGC ATCTCTGTTG TATTCTCGCG
TACCTACTCA ACATGAGCTT GACAACTGTC AGCACATTGA TCTCACTTGT GACCAACCTT
GGGACCCCAA CAGTAAAGAT TGGGAAGATA ATGAAGCAAA GTACACACGA CACGATCGTT
CTCGTCGTGC CTGCTACACC AACAGCGTAC CGGTTGACAT TCTCCCGGAT TGGCCTCCAC
TACCCGTTTC CCCTGGATCC GTGGTACCGG ATTTCCATAA CCGTGTCATG AACTGTCACG
GTATAGTACC ATGCGACATG TCTCCTAGTG ATGTCCGTCC TCGAGACGTC AACACGGTGA
ACGGCGGTTG GAGTCTTCAT AAGGGAGAAG TGAGTCGTAT GGAAGTTAAC TCGGTCTTAT
TGCATGAAAT TCCTAGATAC AATGATGTAT TGTGCGTTGG AGAGAACGCG ACTGAACATG
TCGTGTTCTG ACAGTGGCAA CGGAGTGGGA CTGACAATAC TTATTGCCTG ACTAACGGAT
GTAAATGGAT GCGCTCCATT TCCCGCGGCA TGCATGTTAT GAAAGGTATT TCCGGTTCCA
CTATAAGTAT ATGTGAGCGC GTGTCATGGT ATAAGGATAC TATGACGGAA GAAAGATATT
TGTGTATGTT TGAGTTTGTT CCTCAGGTTT TGTTGTATCT TGGCAAATCG GAGGAGCAAC
AAGAATTAGT TTATAGCACT AATTCTTCAA TCATTGTTTT ATAAGTTCTT TGATCCGCAT
TGCTAGTTTA CGCATAGGTC CTCGTATCCG CTGCCTAACC CGAGGGGAGC GTCGCCAACA
AGTAGAGTTT TACAGTCCCT AAGTCCCTTA GGTGTATCGC CGGTTGTTCG TAATAACGCC
CTCTCTTGTT TACCAGGCTC TGTTCCTAAC AGCGCTTCTG TCCATACGGT GTACATTGGT
GTATATTGTA ACAGATTAAC AGTCTTGGTT TCTCGTCAAA CCACTGCTGC TTATCGCGCA
GAATTTAGTA AACCCACCTT GAGTCCGTCT CAAGGAAACG TCAAGCTTGG TACCAGCGTA
CCTCGTCCGA TAACACTGCC TACATTGTTT GTGTTGCATA AAGTATCAGA GGTGTCTAAG
GAGACATTTA TCGGCTTGTG TTCCGCATCC TTGGAAGCTG CTACCACCAT CCTCCTGACC
ACTGGTATTG AAAACCCATT AGTACTTCAG GGTTTGTCAG TAAGTCGTCT CGGCCTCCCT
ACTTCCTCGG AATAACCGGC ACTGGAAATC GTCTAGGTTT TCTTCTGGAT TTGCCAGTGG
GTTGTTTCGT GATTACGGGT TCTCTTGCCA AGTGAGGTAT TCGATACCAA TAGGCTTGGA
AGACCAATCC TGATTCCGGT TCGGACGGGT ATACTCACCG GTTAATAAGA GTACGGGGGG
GGGACTAATC AACCCTTCGA TAGTTACTGG CACGGAGCGA TATCACGCAC AGCAGTAAAA
CTGCCACCGA GGTGGTAGAA GGGAGTGAAC CAGTGCTGGC AACGTCCACT GGTGTAGGGT
CAAATAAAGA AGTCCGCTTA GTTACAGCGA AGGACCTGAA ATATAGTGGA AGACCTAACC
CCGGAACGCT ACCGACCCGG CTACCCAGCC CAACTCAAGA TCTGACCCGG CTATCCAGCC
CAACCCAAGA CCTGGTTGGT TACCCATTTC AATATGGTTA CCGCTACGCG GACAACGTCC
AATGCAAGCG CTTTCGCTCA TTTACTTGAC ACGGTCCTTG CCCTACCGGC AACATCTCCT
ATCCGTTCTA GTCTTGTACT ACATGAGTTA GATGATCTAG ACGGACTCCT TAGTATTTTT
GAGGGCCAAA TCGAAACTCT AGAATATCTC CCTGTATCAT CCGAAGGTGA CGCAACCCCT
GTCCCAATCA AGTTACGTAT GGGCCATCAA CAACTCTTAC GTTACTTGCT ACTCTGGATA
CGTCAACTCG CGCACGACAA AGGAGGTCCC CTCTCGAACT ACGAACTCAT CTCTCTCATG
AAAGAAGATT TCAGTTTATT TCGACGGTCT CCATCAACTC ATTTGCCGAA TGCAGTCCCA
ACACCCAGTT CACAATCAAG CACTCCTTCG ACTATGGTTG GAAACTCTAG TCGTTCTGCT
GTCGCTGACT TTAAACGCGG TGTTATACGT GATAAAACGC ATTATCCGGT GCTCAAGGAC
GACCGATATT GGGACAACTT CTACCGTACT TTTGTCGTTA CCGCCGTATC GCACAATGTT
GATAATGTCC TAGATCCAGC TTACTCCCCT ACGAATACAG ATGACATATT GCTATTCAGG
GAGCAGAAAA AGTTCGTCTA TTCCGCTCTA GAACACTGCT TGCAAACGGA TATGGGTAAA
AACATTGTCC GCGAGCATGC CTTTGATTTC GATGCACAAA CTGTTTTCGC AAAAGTGGTA
AAACACTACA CCGAATCCAC AGCTGCAAAG ATCAGTTCTG GTACCACACT GTCATACCTG
ACCTCTGCGA AGTAAGGCAG CTCCTGGACT GGAACCGCCG AAGCATTTAT TTTGCATTGG
AAAAATCATC TTCGCATTTA CAACGACACG GTCCCGGTTA CAGAGAAGTT GCCACCACAA
CTTTGCCTCA GCCTGCTCGA GTCCTCTGTA CGCGACGTTT CAGAGCTTCG CCAAGTCAAC
ACTACCGCGA ATCTAGATTT AGCTAAAGGG GGGTCTCCCA TTAACTATGA AAATTACCTA
AGTCTACTCC TTGCTGCCGC GACTTTGTAC GATAAAGGAA ACAATTTTTC TAATTCCCGT
AGCCCAAAAT CCAAGCGCAG CGCCTTTGTT ACTGAGACTA CCTTTCCCGA TGATGAATAT
GGCGTCGATT ACGACATTGA TTTGTCACCG TCCATCCTTT ACGAAGCGAA TGCTCACAAC
CGCAGAGCAG GCGACCAAAA TCGAGAACGC CAGAGCAATG TCAATTGTGA GCGACCGTAT
ATTCCTCGTG AGATGTGGGA TAAACTGTCC GACGATGCAA AGGAGATTCT CCGTGGTATG
TCTTCTCCTA AAGAAGGAAA CGCCTCGGCC AACAGCAAGT CTTCATCTGC ATTTCATGCC
AACTCCCATT CTTTAACCGA TACGGGACAC TCCTCATCAA CGGACGAATC ATTGCACGAA
AATGACAATG ATAAATTCCA TGATTGCGGG AACGACACGG AACTGCTTGC ACACCTTACT
GATCACTCAA GTAATATGGC AAATGGGGAC ATTCGTAAGG TCCTCGCTTC AGCTTCCTCC
TATAAGCAGA ATTCGAAGAA CTCCCTGCAG TCAAATATGC TCGAATACAG TATTTCCCGA
CACTCCGTTG CAGAGACTAC ATCCTCCCTC ATCGACAGAG GCGCAAACGG CGGACTTGCC
GGAAGCGATG TTATAATCCT TAACAAAACA GGCCGTTCTG CGAGCATCAC GGGTATTAAT
GACCATACTT TGCCTGATTT GGACATTGTC ACCGCCGCTG GCCTCGTTGA ATCACAACAT
GGACCCATCA TTGTCATACT CCATCAGTAT GCCCACCATG GAAAGGGAAA AACGATCCAT
TCTAGTGCTC AACTTGAGTA CTACAAGAAT ATTGTCGAGG ACCGTTCCCG TGTTTTAGGC
GGTAAACAAC GTATCATAAC TCTAGATGAT TACGTTATTC CCCTACACGT TCGTCAAGGA
CTAGCTTATA TGGACATGAG ACCTCCTTCC AATGCAGAGT TTGACACGTT ACCCCACGTT
GTACTTACTT CCGATGTCGA CTGGGACCCG TCCATTATCG ACAACGAAAT TGACCTTGTC
ACAGACTGGC ATGATGCCAT ACAGGACCTT CCCAGCGACC CGTACGTTGA ACCCCGTTTC
AATTCAACTG GTGAATACTG ACATAGGCAC GTTGCGACCT TTGACATTTT CTCGTCATAT
GACTTTGTTC ATCGGTCCAC GGCTATCGAT AATATACTCT CGCCAAATCA ACATGACATG
ACCCGCAATT CGCACAATTA CGAAGCCTTG CGTCCTTGTC TTGGCTGGGT CTCCGCCAAC
ACAGTCCAGA AAACCATCAT GGCCACTACG CAATTCGCTC GTGAGGTCTA TAATGCACCT
ATGCGTAAAC ATTTCAAGTC TCGTTTTCCG GCACTTAATG TTCACCGGCG CAACGAAGCT
GTGGCTACCG ATACCATTTG GTCGGACACA CCTGCTGTCG ATAACAGCGC TAAATTTGCG
CAATTATTTG TCGGTAGACG ATCGCTTGTT ACCGACATTT ATCCTATGAA AACAGACAAA
GAGTTTGTTA ATGCACTCGA AGACAATATT CGTCATCGGG GTGCCATGGA TAAACTCATC
AGTGACCGTG CCAAAGCCGA GATCAGCAAG AAAGTTTCTG ATATTACTCG TGCTTACCAC
ATTGATCAAT GGCAAAGCGA GCCCAACCAC CAGCACCAAA ATTATGCTGA ACGTCGAATT
GCAACTGTTG AAGCAAATGC AAATAAAATT CTTAACCAAA CTGGTGCACC TAATTCTACC
TGGTTATTGT GTGTTTCCTA CATTTGTTAT TTGTTTAATC ATTTGGCCCA TGAGTCTTTG
CACGATCGCA CCCCCCTCGA AATTCTTAAC GGTAGTACTC CTGATATTAG TGTACTCCTT
CAATTCCATT TCTGGGAACC GATCTACTAC CGACTTGAAG ACCCTACTTT TCCTTCCGAC
GGAACTGAAA AAAAGGGCCA CTTTGTTGGA ATTGCTGATT CCGTTGGTGA TGCTCTTACC
TACAAGGTAC TCACCAACGA CTCCCACAAG ATCCTTCTCC GATCTAGTGT TCGCTCTGCG
TTGAAACCTA GTGAACCCAA TTTGCGTCTT GAGCCACATG AAGGGGAGAG TCCTCCTAAG
CCCATCAACT TCATTAAGTC GCGCAGAACT GAGGACGGAA ATTCTTATGC CATCCACACG
CTACCTGGTT TCACCCCGGA CGATCTCATC GGACGCACCT TTTTAACCGA TACCCAGGAC
AATGGGGAGC ATTTTCGTGC ACGTATTGCC AGGAAAATTC TTGA
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| Protein sequence | MRCPRKVTPA VPAPAAATDS PADAASASEE EEEFGGFDSS DGQEPSGTAP SLPASSDDEV
AAAMFNNGIK SSDDFRLLTK EDINDLCMRL KMGSMHTKRI LVFAKWMHHA PNSVDVAKEF
TASVLRFEMM TRAAASYDNV TTTAAKAEKS ATSLLPEPFD GSQKKWLTFR YGFEAWAGAS
GSTFTACIAH HSDRYSKADP TGPHTSPRDV SDLFALSPVV NITRNATIFY TLMSLTSAGD
AWGLVEPHEH TKDGRSAWIS LCAFYEGTSQ VGLTTEQARA IVMESVYIGL SKQFSFTKYV
ARHISANNAL LRNKEGYSDA QKTNFFLKGI TDPALLPYKA TAEARLDDGN FNRVVNYMRT
SATKLSSKDR SDSRNWEALT PAIRESILSA KRSIPPPGRE AKRAKSSDTD NSSSTVESYS
QPPSSKKPIR KHTCETHVQV DSSTPETLLR DAPTDISPHV TTKKVTFGAG VLFGRYANRV
SLNRMVRSGS HFDQAPWRKS DFRLNDATLV RIRQNRSRGT KTPTNYGEAV IDTGADTVCV
GAGYSVLSYT GRSVSLRGFH DDGETFDCER IPVVTAATAY DYDDGTTVIL IFHEALNLGP
TQTTSLINLN QIRHAGHQTD DIPKFLSQGK SLHGIETLDG DYIPFELKGH ASLLYSRVPT
QHELDNCQHI DLTCDQPWDP NSKDWEDNEA KYTRHDRSRR ACYTNSVPVD ILPDWPPLPV
SPGSVVPDFH NRVMNCHGIV PCDMSPSDVR PRDVNTVNGG WSLHKGEVSR MEVNSVLLHE
IPRYNDVLLT VLVSRQTTAA YRAEFSKPTL SPSQGNVKLG TSVPRPITLP TLFVLHKVSE
VSKETFIGLC SASLEAATTI LLTTGIENPL VLQGLSLLAR SDITHSSKTA TEVVEGSEPV
LATSTAQPKT WLVTHFNMVT ATRTTSNASA FAHLLDTVLA LPATSPIRSS LVLHELDDLD
GLLSIFEGQI ETLEYLPVSS EGDATPVPIK LRMGHQQLLR YLLLWIRQLA HDKGGPLSNY
ELISLMKEDF SLFRRSPSTH LPNAVPTPSS QSSTPSTMVG NSSRSAVADF KRGVIRDKTH
YPVLKDDRYW DNFYRTFVVT AVSHNVDNVL DPAYSPTNTD DILLFREQKK FVYSALEHCL
QTDMGKNIVR EHAFDFDAQT VFAKVVKHYT ESTAAKISSG TTLSWTGTAE AFILHWKNHL
RIYNDTVPVT EKLPPQLCLS LLESSVRDVS ELRQVNTTAN LDLAKGGSPI NYENYLSLLL
AAATLYDKGN NFSNSRSPKS KRSAFVTETT FPDDEYGVDY DIDLSPSILY EANAHNRRAG
DQNRERQSNV NCERPYIPRE MWDKLSDDAK EILRGMSSPK EGNASANSKS SSAFHANSHS
LTDTGHSSST DESLHENDND KFHDCGNDTE LLAHLTDHSS NMANGDIRKV LASASSYKQN
SKNSLQSNML EYSISRHSVA ETTSSLIDRG ANGGLAGSDV IILNKTGRSA SITGINDHTL
PDLDIVTAAG LVESQHGPII VILHQYAHHG KGKTIHSSAQ LEYYKNIVED RSRVLGGKQR
IITLDDYVIP LHVRQGLAYM DMRPPSNAEF DTLPHVVLTS DVDWDPSIID NEIDLVTDWH
DAIQDLPSDP HVATFDIFSS YDFVHRSTAI DNILSPNQHD MTRNSHNYEA LRPCLGWVSA
NTVQKTIMAT TQFAREVYNA PMRKHFKSRF PALNVHRRNE AVATDTIWSD TPAVDNSAKF
AQLFVGRRSL VTDIYPMKTD KEFVNALEDN IRHRGAMDKL ISDRAKAEIS KKVSDITRAY
HIDQWQSEPN HQHQNYAERR IATVEANANK ILNQTGAPNS TWLLCVSYIC YLFNHLAHES
LHDRTPLEIL NGSTPDISVL LQFHFWEPIY YRLEDPTFPS DGTEKKGHFV GIADSVGDAL
TYKVLTNDSH KILLRSSVRS ALKPSEPNLR LEPHEGESPP KPINFIKSRR TEDGNSYAIH
TLPGQWGAFS CTYCQENS
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