Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38709 |
Symbol | |
ID | 7203721 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 4844 |
End bp | 5547 |
Gene Length | 704 bp |
Protein Length | 222 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182754 |
Protein GI | 219124950 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.485633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGCG ACACCCATGA TATTTCTGAA ATCCTGGTTT TCGAATTTTT CGAACCAGTT CAGTATTTTG ACAATCCCGA TGTCAAATTT CCACTAAATA AAGCCAAAGT CGGCCGTTGG TTAGGTATTG TAACCAATGT GGGCCAAGCC TTGTGCTACC ATATTTTGAC GGACAAGGGT ACTGTAATCA CTCGATCTAC TGTTACACCC CTCCAAAACC TCGATTCGTC TGCTCTGCAG ACTGCCCTCG CTACTTTTGA CGCCGCCATA AGGGAGACTT ATCAGCCTTC TGATTTCGCC CTCGGCAACA AAATCAAAGC GCCGGCTTTC CGCCGTGACG AAGCGATGAA AGTCGCTCGG CGATCCGACG ATCCCGGCGA TGGCAACACC CGTAACAGAC ATGTGTTATA CGATCTGAAC GAAGGGGATG ACCATATTCA ACTGGATCCC GGGCTCACGG TTGACAATTT CTTCGAGAAC GACTCACCGG ATCAGGACCC CACCTCCTTA ATTATTGGTA CTGACGTTCT ACTCACTTCG GGTGCGGTTC AGCGCCAGGG CCGAGTTATC AAGCGCAATC GCGACGGTAC TCCAGTCCCT AACGACGACC CTGGAAATTT CGTTGTCGAA TTCGACGACG GTACCGAGGA AGTCCACGGT TACCAAGCTC TCATTGATGC TGTTTATAAG CAGGTCGACA ATGA
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Protein sequence | MTGDTHDISE ILVFEFFEPV QYFDNPDVKF PLNKAKVGRW LGIVTNVGQA LCYHILTDKG TVITRSTVTP LQNLDSSALQ TALATFDAAI RETYQPSDFA LGNKIKAPAF RRDEAMKVAR RSDDPGDGNT RNRHVLYDLN EGDDHIQLDP GLTVDNFFEN DSPDQDPTSL IIGTDVLLTS GAVQRQGRVI KRNRDGTPVP NDDPGNFVVE FDDGTEEVHG RQ
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