| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_22459 |
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| Symbol | PTD5b |
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| ID | 7203691 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011685 |
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| Strand | + |
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| Start bp | 558740 |
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| End bp | 560487 |
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| Gene Length | 1748 bp |
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| Protein Length | 455 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | delta 5 fatty acid desaturase |
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| Protein accession | XP_002182858 |
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| Protein GI | 219125167 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTGACCCCA ACGGGGAACC ACAACCAAGC CCGCACCGAA CAGTGACTAA CCAAAGGATT
CGACCGCCTG ATCCTCACTG ACCACTAAAA CGGAACCCCA TTCCCGCCGT AGACTTGCCG
TTACACAGAT ATATCTTCTC CCCTCGGTCT CGAGAGACTT TAATTCGTTG GCTTTCTCTC
CCCGTCCAGT CGTTATGTGC GTCACGACGC CGGTACCGGT CCACACCTCC GGTTCGAGCG
CACGCCGCCA TGGACGTGTC GTTACGGAAC AAATCACTGT CGGTCGACAC CTTGGCTCCC
AATCACGTTT GTATCGACGG GAAGGTCTTC GATTTGGACT CGTTCGATCA TCCCGGGGGG
GATTCCATTC ACGTCTTTGG AGGCAACGAC GTGACGGTCC TGTACAAGAT GATTCATCCG
CATCACGGAC CCAATCAATA CGCGCAAAAG ATGAAACTAG TCGGTGTGAT TGACAAATAC
CGGTGCGAGT AAGTGCCCGC GATGGATACA GACAGACAGA GAATGAGAGG AGCTTTGGGC
AAGCTGCTAG CCTTGTTAGT CTATCGGCTA CCGGCCGAAA AAACACCATT CCTCATCGAC
CTGTTTCTAA AACTGTTAGG TATTCGTTCG ATTCCGATTT TGGCAAAGAG ATGAAACGCG
AAGTCTTCCA GATTGTCCGT CGCGGACAAG AGTTCGGCAC CGTGGGTTAC TTCTTCCGAG
CCTTCCTCTA CATTGCCTTT TTCGTTGCCG TGGTGTACCG ATGGACCTTT CAGACGGGTC
CCTCCTACGC GTTGGCTGTT GTTTTTGGCC TGGCAAAGGC TTTGATCGGA CTCAACGTCC
AACACGACGC CAATCACGGC GCTGCCGCCC CGCCGGGACG CAAGAACGTA TGGATCAACG
ACCTCCTCGG GTGGGGAGCC GATCTCATTG GTGGCTGTAA ATACCTCTGG ATTCAAAAAC
ACTGGACGCA CCACGCCTAC ACCAATCACG CGGAGAAGGA TCCCGACGCC TTTGCCGCCG
AACCGTTTTT GATCTTCCGA GAGTATCCCG CATCGCATCC TGCCCGGCAG TGGTACCACA
AGTATCAAAC GCTTCTCTTT CTACCAATCA TTGCCGGTTA CTGGCTCTCA TCGGTACTTA
GTCTGGAAGT AGCCAAACTG CAGGACGCGG GCGCCATGAG CGCCACGATG AAATTCGAAA
ACAATTTCGT GGCCCGACAA CGCAAGTTTA CGGTCTTTTG GCGCATTGTG CATTTGGTTA
TTATTTTGGG ACCGCCCTTG CGGCAACACG GTCTCACCGC CACCGCACTC GGACAAGCAT
TGACGGTAGG GGCGGCGGGG AGTCTTTTCT TGGGATGTCT CTTTTCCTTG TCGCACAACT
TTGTCAACGC CGAACGGGAC CCCACCGCCA TCCTGGCGCC ACCACCAACG TCAACCGACG
GGAGTGACAA CGAGAACACC ACCGCACCCG TCTGCTGGTA CAAAGCCCAG GTGGAAACCT
CCTGCACCTA CGGTGGCTTT GTCTCGGGTG CGCTCACGGG CGGTCTCAAT TTTCAAGTCG
AACACCACTT GTTCCCGCGA ATGAGTTCGG CCTGGTATCC CTTTATTGCC CCCACAGTGC
GCCGTGTCTG TGCGAAACAC AACGTTACTT ATACCTACTA CCCCTGGCTC TGGCAAAACA
TGGCGTCCAT GATGCGGTAT TTGCACGTGA CTGGTGGAAA TACGGACGCA ATTACCAAAT
TGGAGTAA
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| Protein sequence | MDVSLRNKSL SVDTLAPNHV CIDGKVFDLD SFDHPGGDSI HVFGGNDVTV LYKMIHPHHG
PNQYAQKMKL VGVIDKYRCE YSFDSDFGKE MKREVFQIVR RGQEFGTVGY FFRAFLYIAF
FVAVVYRWTF QTGPSYALAV VFGLAKALIG LNVQHDANHG AAAPPGRKNV WINDLLGWGA
DLIGGCKYLW IQKHWTHHAY TNHAEKDPDA FAAEPFLIFR EYPASHPARQ WYHKYQTLLF
LPIIAGYWLS SVLSLEVAKL QDAGAMSATM KFENNFVARQ RKFTVFWRIV HLVIILGPPL
RQHGLTATAL GQALTVGAAG SLFLGCLFSL SHNFVNAERD PTAILAPPPT STDGSDNENT
TAPVCWYKAQ VETSCTYGGF VSGALTGGLN FQVEHHLFPR MSSAWYPFIA PTVRRVCAKH
NVTYTYYPWL WQNMASMMRY LHVTGGNTDA ITKLE
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