Gene PHATRDRAFT_22357 details

Gene Information

• Locus tag: PHATRDRAFT_22357
• Symbol: GLNA
• ID: 7203740
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011685
• Strand: -
• Start bp: 107753
• End bp: 110638
• Gene Length: 2886 bp
• Protein Length: 716 aa
• GC content: 53%
• Product: GLNA, glutamine synthase
• Protein accession: XP_002182898
• Protein GI: 219125251

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.10441
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACACAGACA ACACCAGTCC CCCCGAAGGA ACCCCAGTTG CACCAAGCAA AACACACACA 
CCAAATTCGA ACACGACGCA CCCTCGTGCA GGCAGCAACC ACGATATCCT GATCGATCAC 
AACGTATAAA GCGTGTGTCC GCATTCTGCC TCCCTACCTA ACACACACAC TCGTATACTC 
TCTCATATAC ACACCACATC CCAAACTTCC AAGCATGTTT GCCTCTCGTG CTGCTGTTCG 
TCATTTCGTG CGTCGGGAAA CGTCCCGTTG CGGGATCATC CGTACGTTCG CCAACCTCGA 
CCAATTCAAC GATTTCGGCA AGCACGTCTT TACCGGAAAG ATTGCCGACC AATACCTCGC 
CAAGCACGGC GGAAGCGGAG ATATGCTCAA GGATCCTACC TGGGTCAAGA AGCATTCCGA 
TACCGTGGCA ATGGCTGTCT TTGATTGGTA CGTTGTTACT CGTGGAGTGA GGATTGACAC 
TGGAAGGTAG TGATGCGTTG CGTTGCGAGC CCCGCAGTCT CTCTCGCTTT CCCCAGGGCA 
GACTGCTGGA TTACACTGCT GGATCTACTC CTTCTCCTCG TCGTCGTCGT CGTTGTTGTT 
GTTGGCCTCC AACAATCGAG AGATAACCTA CTGTTGTGAC TGTCGTTTTG TCCAAGTCTC 
CATTCTCACC ATCCACACGC TCCTCTATTT CCTTTGTATA CTCTACCCGA TGATACTGTC 
TCCATCAGGG CCATCGAACA CGGCGCCAAC GTGTACTGCC ATTGGTTCCA GCCCATGGCT 
TCCAGTGGAG TCCGTCACGG TCTTACAGGT CAAGTCCACA ACATGATGTT CAAGTTTGAC 
AAGAACAACG AGATCGTGCA GGACTTCAAG GGAAAGACAC TCACCAAGGG AGAGACGGAC 
GGATCTTCCT ACCCCAACGG TGGATTGCGC AGCACGCACG CGGCCGGAGG TTACATTGCC 
GTCGACACCT CATCGCCCAT TTTTCTGCGT GGGGACACCA TCTTCATCCC GTCCGTCCTC 
GTTTCCTTCT ACGGAGCAGC GCTCGACGAA AAGACACCCC TGCTCCGCGC CAACGCCGCC 
ATTGACAGGC ACGGCAGTCG TCTTCTCAAG CATCTGGGGT TGAACACGGA CCACGGTATC 
CAGACAAATA TTGGTCTCGA ACAGGAAATC TTTTTTGTCT CCCGCGATCA GTACTACCGC 
CGCCCCGATC TTCAGCTCAC CGGACGTACC TTGATTGGAA AGTCTGCCCC TCGTGGACAA 
GAAATGTCGG ATCATTATAT GGCCCCCCTC TCCAGTGCTA CCGCCGCCCT GGCCTGTATG 
CAAGATATCC AAGACGAGTG CTGGCGCATC GGTATCCCCC TCAAGACACG TCACCGTGAA 
GTCGCCCCCA ACCAGTTCGA GTTTGCTCCT CTCTACGGAA CCAACACCAC GCAGATTGAC 
CAGAACATTA TGGTCATGCA GATCATTGAA GAAGTCGCCG CCAAGTACGG GCTGGCCGCA 
CTCCTACAAG AAAAGCCCTT CGACGACGTC AATGGCTCTG GCAAGCACAA TAACTGGTCC 
ATTGCCACTC GCGATGGTGT CAACGTCCTC GATCCCGACG ATCTAGCCAA GGCCTCCGGC 
AACGACTTTG CCTTTCCCAT TATCATGGCG GCCATTATTT CCGCCGTTGA CGAGCACGGT 
GATTTGATGC GCATGAGCAT CAGCTCGCCC GGTAACGATT TCCGGCTCGG TGCCTGCGAA 
GCCCCGCCAG CGATTGTATC CACCTACCTC GGAAAGGACA TGTCGGACTA CATTGAAGCC 
TTTATGAACG GCTCCGCTGG TAAATACAAT CCCACCAAGA AACTTATCGA CCTCGGTACC 
TTTGAAGTCA TCCCCTTTGA AGTCCCTGCG GAAGATCGCA ACCGTACTTC TCCCTTCCCC 
TACGGTGGTG CACGCTTTGA GTTCCGTGCC GTCGGTTCTT CGCAGAACCC TTCCATGGTC 
AACACGGTCC TCAACACGAT TGCGGCCGAA AAGTTTGCCG AATTCGCCGA CCGCATCGAA 
GCCGGCGAAG ATGCCGTCGA AATCGCCCGG TCCACCCTCA AGAAACACTG GAAGGTTGTC 
TTCAATGGCG ACAACTACGA CGAAGAGAAC CAAAAGATGT TGACTGAACG CGGACTCTGG 
CGTATTGATT CCGGTGTCGA AGCAATTGCT CGCTTGACTC ATGACAAGAA TATTGCCTTG 
TTTGAAAAGA TGGGTGTCAT GACCAAGGAC GAGTGTACAG CGCGTCAGGA CATTCTTCAC 
GAACATTACA CTGGAACGGT AGTTATGGAG GCACTCTGTA TGATTGACTT GCTCAACCAG 
CACATTGTCC CCGACGTCAA GGAAGCCGGA ATTGGTCCGC TTGCGGAATT GGAAACGTTT 
GCGCCCAAGC TCAAGACCGC CTTGGCCGAA ATTGCCAAGG AAAAGGACTC GTACAAGAAG 
GCGCAGATGG CCCGCGTTCT GCGTCTCGAA ACCATGATTG AAATCCGCGA AGTGTGTGAC 
GAAGCCGAAG AAGTTGTGCC CGCCAAGATT TGGTCCCTGG CGACCTACAA GGAGTTGCTC 
TTTTTGGATT CTCACACGTC GCAGACCGCC ATGGATCCGA TGGAGAATGA TGATTACTCA 
ATTTAAAAAA AGAGACAACC GTATTCGAAC AAGGAATGAC AGTGAAATAA TTTTGGAAGG 
TTCTCCGTGA CAACCGGTGT GTTGGTTCGA AGACTGCTTA TTTTTTCGCG AGAGCGCCAG 
TTACGTCCGA TTTTCGTATA TTTTTGAATT ACAAGCATTG TACTGCAACA AAGCATTTGC 
TGCCTGACGT TTAGTTAATT CGTTAGGATT AGAAGGCAAC GGGCGTTTGA GCTATCCAAA 
CACAGC 

 

Protein sequence

MFASRAAVRH FVRRETSRCG IIRTFANLDQ FNDFGKHVFT GKIADQYLAK HGGSGDMLKD 
PTWVKKHSDT VAMAVFDWAI EHGANVYCHW FQPMASSGVR HGLTGQVHNM MFKFDKNNEI 
VQDFKGKTLT KGETDGSSYP NGGLRSTHAA GGYIAVDTSS PIFLRGDTIF IPSVLVSFYG 
AALDEKTPLL RANAAIDRHG SRLLKHLGLN TDHGIQTNIG LEQEIFFVSR DQYYRRPDLQ 
LTGRTLIGKS APRGQEMSDH YMAPLSSATA ALACMQDIQD ECWRIGIPLK TRHREVAPNQ 
FEFAPLYGTN TTQIDQNIMV MQIIEEVAAK YGLAALLQEK PFDDVNGSGK HNNWSIATRD 
GVNVLDPDDL AKASGNDFAF PIIMAAIISA VDEHGDLMRM SISSPGNDFR LGACEAPPAI 
VSTYLGKDMS DYIEAFMNGS AGKYNPTKKL IDLGTFEVIP FEVPAEDRNR TSPFPYGGAR 
FEFRAVGSSQ NPSMVNTVLN TIAAEKFAEF ADRIEAGEDA VEIARSTLKK HWKVVFNGDN 
YDEENQKMLT ERGLWRIDSG VEAIARLTHD KNIALFEKMG VMTKDECTAR QDILHEHYTG 
TVVMEALCMI DLLNQHIVPD VKEAGIGPLA ELETFAPKLK TALAEIAKEK DSYKKAQMAR 
VLRLETMIEI REVCDEAEEV VPAKIWSLAT YKELLFLDSH TSQTAMDPME NDDYSI