Gene PHATRDRAFT_15083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15083 
Symbol 
ID7203639 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp265377 
End bp266608 
Gene Length1232 bp 
Protein Length374 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182805 
Protein GI219125057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTCCGGTCG TCGTGGCAAT CTGGAAGGGT CGTGACGAAG GCTTGCCCGT ACTCGTCTTG 
AATAGTCACT ACGATGTGGT GCCGGCCGAT ACGTCTGCGT GGACCGTGCC ACCCTTTGCA
GGGTTACAGC GGGACGGCAA CATATACGGA CGAGGCACAC AGGATATGAA GTGTGTTTGT
ATTCAGTACG TGGAAGCCAT ACGACGCATT CATCGGCTGG ATCCAACCTG GCAGCCTGAA
CGGAGTATCT ACTTAACCTT TGTACCGGAT GAAGGTAAGC AGCCAACCAC TTTTCTGGCG
TCGGAGAAAA GTATTGGGAT GCTACCTTTC CATTGACTGT GAGTGCTCAC GGTTTGTTGT
TTGCATCGTT CACGTTTGCA GAGGTGGGAG GCTTTGGAAT GGCCGCATTT TTGGAATCCG
AAACCTACCG CAGCCTTCCC GGTATCGCAT TGGCATTGGA CGAAGGCTTG GCCTCCACGA
CCGACACGTA TTCCGTATTT TACGGGGAAC GCTTGCCTTG GTGGGTTGAT GTGACGGCAC
ACGGTCCGAC CGGCCACGGT TCCCGCTTTA TCGAAAATAC CGCAGTCGAA CAGCTGGTGG
AACTCGCCAA CAAGGCCTTG GCCTTTCGAG ATGGCCAGCG AGCGCAACTG GGATTGGACG
AGCACGTCAA TTGCGCACAC GCAGTCGCGG CGAAAACGTT GGGCGACGTG ACCTCCCTCA
ATATTACCAC TCTTCAGGCG GGTGTCAGGG TCGGGGAGAC GTTTGCCTAC AACTGTGTCC
CACCCAAAGC GCAATGCAGT TTGGATATTC GCATTTCGCC GCACGTGGAA CCCTCAGAGA
TTGGAGAAAT GCTGGATCAA TGGTGCCGGG AGTGCAGTAA GGACGAAAAG AACAAGGTTG
AATGGTCCTT TCTTGGCAAC GGCAACGATA TGAAGAAGCA TTCCGTAACC TCGACCGACC
CAAATCAGAA CCCCTGGTAT GCTGTCTTTT CGAAAGCCAT GGCGGACATG AATCTCAAGT
TTGAACCGCA AGTATTTCCT GCGGCCACCG ATTCACGCTT TCTGAGAGCA CTGGGTATTC
GAGCTTTGGG GTTTTCACCC ATGAAACAAA CCGAAATCAT GCTCCACGAA AATGACGAGT
ACATTCCCGA GTCAATCTTT TTGGAAGGAA TTGACGTTTA CGTGGGTTTG ATTCGAAGTC
TAGGCGGAAT AGGCAAAGAT GTTGATGCAT AA
 
Protein sequence
SPVVVAIWKG RDEGLPVLVL NSHYDVVPAD TSAWTVPPFA GLQRDGNIYG RGTQDMKCVC 
IQYVEAIRRI HRLDPTWQPE RSIYLTFVPD EEVGGFGMAA FLESETYRSL PGIALALDEG
LASTTDTYSV FYGERLPWWV DVTAHGPTGH GSRFIENTAV EQLVELANKA LAFRDGQRAQ
LGLDEHVNCA HAVAAKTLGD VTSLNITTLQ AGVRVGETFA YNCVPPKAQC SLDIRISPHV
EPSEIGEMLD QWCRECSKDE KNKVEWSFLG NGNDMKKHSV TSTDPNQNPW YAVFSKAMAD
MNLKFEPQVF PAATDSRFLR ALGIRALGFS PMKQTEIMLH ENDEYIPESI FLEGIDVYVG
LIRSLGGIGK DVDA