Gene PHATRDRAFT_15081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15081 
Symbol 
ID7203799 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp147515 
End bp148741 
Gene Length1227 bp 
Protein Length368 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182780 
Protein GI219125004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGC TCGAAAGTCT CGCTTCGCAG CGTCCGACAC CGCTGCGTCT CGCTGACATG 
TACGAGTATG GGCGCGGTAT AGATCCGGCG CAACGTCTCC GCAATTCGCA GTTCCTTCAT
CGTGAATTGC CCATTCGCGT CGCCCAACGC GCCTACGACT TACTCACTTT GCCACACGGC
TTGTCCAACG CCACACCCAT TCGACAAGTC GCCGCAACCT ATATACAATA TCTCCAGCAG
TTTAAATCAC GACCCTGCCC GCAGAACAAG CCACAGGAAG AAGAGTTTAC GGATTTTGTG
CAATCGCTGG TGCTGGATCG CGCGGCCGTT CCGATTTCGA TTTTTCGGGG TATTTTGGCT
TGGATGGGAT CAGCCCCGCA TAGCGACGAT GACCGCCAGG ATCAAACTTC CTCATTGTCG
TCCTTGGAAG AGCAACCCGA TCGGTTGCAG GAAATGGAAG ATGCCTTGTA CAGGTTTTTC
ACCGCCCGAG TGGGGTTGCG GTTTTTAACC GTTCATCACG TATTGTCGTC CCGCCGTCCG
TCGGCTAAGG CATTGAAAGA TGTCACGTTT TTGTTCCCAC CGGACCAAAG CGATGATTTC
TTGGGATGTA TTCAAACTAA CTGCGATCTT GTTAAGGAAG TTAACAAGGT TGCAAAGTTA
ATTCATGAGC AAACAATGGA ATATTACGGT ATCTGTCCAG AAATTGAAGT AGTGGACTGC
ATCGAGGATA CGGATCAGGC AAAAGACGGC AAGAGCAAAA ACAAAACGCG AGACTTTACC
TACGTTCCTC ATCATTTGCA CTACATGATT TGCGAACTCT TGAAAAACTC ATGCCGGGCT
ACGGTCCAAC AATTTCGTGC GCAAGAAATG CACACCCAGG GTCCATACGG ACACGATAGC
GCCAAAATTC CCTCGATCAA GGTCGTCATG GTCAAGGGTG AAGAAGATGT GACAATTAAA
GTTGCCGACA AGGGTGGTGG CATTCCCCGC TCCAAAATGG AGCGCATTTG GAAATTTGCA
CATTCGACGG CGGACCAGAA CGAAGCGGAA TCCGATTTTG GAACGGACGC GACTAGTGGT
GCACGGATTC GCGGATTTGG CTTGCCACTC GCACGTATTT ACGCGCGCTA CTTTGGAGGC
GAATTGACTC TGAAGTCGAC GGAAGGGTAC GGGTTGGATG CGTACTTGCA TTTACCGCGA
CTTGGAGATG CCTGCGAGAA GCTACCC
 
Protein sequence
MQQLESLASQ RPTPLRLADM YEYGRGIDPA QRLRNSQFLH RELPIRVAQR AYDLLTLPHG 
LSNATPIRQV AATYIQYLQQ FKSRPCPQNK PQEEEFTDFV QSLVLDRAAV PISIFREQPD
RLQEMEDALY RFFTARVGLR FLTVHHVLSS RRPSAKALKD VTFLFPPDQS DDFLGCIQTN
CDLVKEVNKV AKLIHEQTME YYGICPEIEV SKNKTRDFTY VPHHLHYMIC ELLKNSCRAT
VQQFRAQEMH TQGPYGHDSA KIPSIKVVMV KGEEDVTIKV ADKGGGIPRS KMERIWKFAH
STADQNEAES DFGTDATSGA RIRGFGLPLA RIYARYFGGE LTLKSTEGYG LDAYLHLPRL
GDACEKLP