| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_14994 |
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| Symbol | GFA1 |
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| ID | 7203560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011685 |
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| Strand | - |
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| Start bp | 170206 |
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| End bp | 172026 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | glutamine-fructose-6-phosphate transaminase |
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| Protein accession | XP_002182913 |
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| Protein GI | 219125282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.703916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCGACGGCC TCACCATTTT GAAGAATCGC GGTTACGATT CGGCGGGTCT CGCCACTACG
GACAGCGACG GCAGTCTCGT GGTGACCAAG TTTGCCAGTG ACGGGGACAA GGCCGATTCG
ATTGAGTTGG TGCGCGCACA TTCCCAGTTG TCGGCGGGAC ACGTCATCGG CATTGCGCAC
ACCCGATGGG CCACACACGG AGGAAAAACC GACGAGAACG CCCATCCTCA CGTTGACTCG
TCCGGAAAAA TCGCCCTCGT CCACAATGGC ACTCTCAACA ACGCGAACGA TCTACGACGG
GATCTACAAA AAATGGGACA CAAATTTACT TCCCAGACCG ATACCGAAGT CATTGTCAAA
CTGATCGGAC ACTACTATGC ACAAGATAAG TGTGACATTA AGACGGCAAC GGAAAAGGCG
CTCGCCATTT GTGACGGTTC GTGGGGACTC TGTATTATGT GCACCGATAC GCCGGATGAA
CTCGTCGTCG CCTGCAACGG ATCGCCCCTC GTTATTGGAA TTGCTGATGA TCGGACCTTT
ATCGCCTCGG AAACGTCCGC CTTTAATCGC TACACCAAAA ACTTTATTTC TATGAAAGAC
GGGGAAATTG GCGTGCTGCA TTCGGATGGA CGCGCGCTCG ATCTCAGTCG CAAACAACTC
GCACCGGATC AAGAAGTTAA ACTCCGACCG GACCCCTACC CCCATTGGAC ACTCAAGGAA
TTGACGGAAC AACCCGAAGC CATTGCTCGG GCTCTCGGCT TTGGTGGACG CCTCGGAGCG
GATCAGGTCT TTCTGGGTGG ACTCGACGGT AACCACGAGC GGATATCCGA TATTAAGCAC
ATGATGCTGT CGGCCTGTGG GACTTCCCTG AACGCGGCAC GGTACGGTGA ACGACTCATG
AAACACTTGG GTTCCTTCGA CTCGGTTGTG GCATTGGATG CGGCCGAAAC CGACGCCAAG
GACTTTCCCT GTCAAAAAAA TATCAAAGAA ACCGGCTGCA TTGTGGTTTC TCAGTCGGGA
GAAACCAAGG ACGTGGTGCG GGTCGTGGCA CACGCCATGG ACAAGGGTGT AACCGTCATG
TCGGTGGTCA ACGCCGTCGG ATCCTTGATT GCCCGAACCA CTAAAATGGG CGTGTACTGT
AATGCTGGCC GGGAAAATGC CGTGGCCAGC ACCAAAGCTT TTACCACGCA GGTGACGGTT
CTGGCGTTGG TGGCACTCTG GTTCAAGCAA TCGCGTGATC GGATCTCGGG CAAGATCGAT
TCGTTGGAAA GTCAACGATT GCGGGACGCG CTCATGCGTC TACCCATTAC CTTTGGAATG
GCACTCAAAA CGAGGGACCA GTGCAAATTG ATTGCAGAGC GACTCAAGAA CAAGGAGCAC
TGCTTTGTCT TGGGCAAAGG CTATGGTGAA CCCGTTGCCA TGGAAGGTGC TCTAAAAATC
AAGGAAATGT GCTATTTGCA CGCCGAAGGC TATAGCGGTG GCGCTCTGAA GCACGGTCCA
TTTGCCCTGA TCGAGGACGA CAGCGGTAAA TTCGGGGCGA CACCGATTAT TATGCTGATT
TTCGACGATG AGCACGCTCA CCACATGCGG ACAGCTGCGG AAGAAGTCAA GGCTCGGGGT
GCAGAACTCA TCATCATCAC GGACAAGCCG AGATTGGCGG CCGATTTGGA TCCCAATCCT
ATTGTTATTT CCAACAATGG TCCGTTAACG GCTCTCGGTG CTGTCCTGCC CCTGCAATTG
ATTGCCTATG AACTCGCCAT GCTTCGCGGT ATCAATCCGG ATACACCGCG GAACTTGGCC
AAGGCGGTTA CGGTAGACTA G
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| Protein sequence | LDGLTILKNR GYDSAGLATT DSDGSLVVTK FASDGDKADS IELVRAHSQL SAGHVIGIAH
TRWATHGGKT DENAHPHVDS SGKIALVHNG TLNNANDLRR DLQKMGHKFT SQTDTEVIVK
LIGHYYAQDK CDIKTATEKA LAICDGSWGL CIMCTDTPDE LVVACNGSPL VIGIADDRTF
IASETSAFNR YTKNFISMKD GEIGVLHSDG RALDLSRKQL APDQEVKLRP DPYPHWTLKE
LTEQPEAIAR ALGFGGRLGA DQVFLGGLDG NHERISDIKH MMLSACGTSL NAARYGERLM
KHLGSFDSVV ALDAAETDAK DFPCQKNIKE TGCIVVSQSG ETKDVVRVVA HAMDKGVTVM
SVVNAVGSLI ARTTKMGVYC NAGRENAVAS TKAFTTQVTV LALVALWFKQ SRDRISGKID
SLESQRLRDA LMRLPITFGM ALKTRDQCKL IAERLKNKEH CFVLGKGYGE PVAMEGALKI
KEMCYLHAEG YSGGALKHGP FALIEDDSGK FGATPIIMLI FDDEHAHHMR TAAEEVKARG
AELIIITDKP RLAADLDPNP IVISNNGPLT ALGAVLPLQL IAYELAMLRG INPDTPRNLA
KAVTVD
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