Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_14899 |
Symbol | APC10 |
ID | 7203611 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 446202 |
End bp | 446747 |
Gene Length | 546 bp |
Protein Length | 148 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182838 |
Protein GI | 219125124 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.710763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAAATCGGTC GCGAAGCTCT TTGTTGGCAG CTATCCAGTG CGAAACCTGG GAACGGTGTG GAACAAATTC GAGATAAATC CGTAACAACC TACTGGCAAT CAGACGGGAC AGCGCAGCCG CACTGGATCC AAGTTCATTT CGGACGGCGC GTTGCTATTA GTCACGTTTG CCTCTATCTG GATTTTTCGT TAGACGAATC GTACACTCCA AAGAGAATTA CGATTGAAGC TGGAATGACA ACACAGGACC TATCATTCGC AACTTATCCC GTGAATACCA GTATTGAAGT ACATGAACCT GTCGGATGGT GTGTCATTCC TCTTTCATCC CCTCCAGACC CTTTAGATGA TGATGCTGAC GATGAAGATG ATGATGACAT GGATGAAGAC ACCGGAGACT ACTCATCATT AGCACGCCAA CTAGACCCTT ACAACTCTCG AAAGCTTGTC CGGGCTCACC TGATTCGAAT TTCAATTATC AGTATGCATC AGAATGGTCG GGATACGCAT GTACGCCAAG TGCAGCTATA CGGTCCCCGA ACATCC
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Protein sequence | EIGREALCWQ LSSAKPGNGV EQIRDKSVTT YWQSDGTAQP HWIQVHFGRR VAISHVCLYL DFSLDESYTP KRITIEAGMT TQDLSFATYP VNTSIEVHEP VGWSRQLDPY NSRKLVRAHL IRISIISMHQ NGRDTHVRQV QLYGPRTS
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